Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.36□□□□□ -2.03
ACLYP53396 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.36□□□□□ -2.03
ACLYP53396 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.36□□□□□ -2.03
ACLYP53396 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.36□□□□□ -2.03
ACLYP53396 AL357094.1-201ENST00000603845 844 ntBASIC2.36□□□□□ -2.03
ACLYP53396 AC006270.3-201ENST00000605967 1036 ntBASIC2.36□□□□□ -2.03
ACLYP53396 AC116618.1-201ENST00000634617 774 ntBASIC2.36□□□□□ -2.03
ACLYP53396 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ACLYP53396 AL137003.2-201ENST00000606924 2538 ntBASIC2.36□□□□□ -2.03
ACLYP53396 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.36□□□□□ -2.03
ACLYP53396 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
ACLYP53396 RNU6-223P-201ENST00000362830 107 ntBASIC2.35□□□□□ -2.03
ACLYP53396 ERHP2-201ENST00000402323 299 ntBASIC2.35□□□□□ -2.03
ACLYP53396 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
ACLYP53396 UBE2FP1-201ENST00000416536 447 ntBASIC2.35□□□□□ -2.03
ACLYP53396 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.35□□□□□ -2.03
ACLYP53396 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.35□□□□□ -2.03
ACLYP53396 Z80107.1-201ENST00000436830 412 ntBASIC2.35□□□□□ -2.03
ACLYP53396 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.35□□□□□ -2.03
ACLYP53396 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.35□□□□□ -2.03
ACLYP53396 PAXBP1P1-201ENST00000449315 447 ntBASIC2.35□□□□□ -2.03
ACLYP53396 USP9YP10-201ENST00000454868 628 ntBASIC2.35□□□□□ -2.03
ACLYP53396 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.35□□□□□ -2.03
ACLYP53396 RPS29P20-201ENST00000489592 171 ntBASIC2.35□□□□□ -2.03
ACLYP53396 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.35□□□□□ -2.03
ACLYP53396 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.35□□□□□ -2.03
ACLYP53396 SCARNA17.1-201ENST00000516211 143 ntBASIC2.35□□□□□ -2.03
ACLYP53396 SCARNA17.2-201ENST00000516334 143 ntBASIC2.35□□□□□ -2.03
ACLYP53396 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.35□□□□□ -2.03
ACLYP53396 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.35□□□□□ -2.03
ACLYP53396 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.35□□□□□ -2.03
ACLYP53396 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.35□□□□□ -2.03
ACLYP53396 AL359212.1-201ENST00000556608 614 ntBASIC2.35□□□□□ -2.03
ACLYP53396 AC009712.1-201ENST00000564938 316 ntBASIC2.35□□□□□ -2.03
ACLYP53396 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.35□□□□□ -2.03
ACLYP53396 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.35□□□□□ -2.03
ACLYP53396 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.35□□□□□ -2.03
ACLYP53396 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.35□□□□□ -2.03
ACLYP53396 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
ACLYP53396 AF038458.1-201ENST00000588406 262 ntBASIC2.35□□□□□ -2.03
ACLYP53396 AC135507.1-201ENST00000607214 561 ntBASIC2.35□□□□□ -2.03
ACLYP53396 SCARNA17.4-201ENST00000614296 143 ntBASIC2.35□□□□□ -2.03
ACLYP53396 AL160394.1-201ENST00000624765 724 ntBASIC2.35□□□□□ -2.03
ACLYP53396 AC004808.1-201ENST00000627671 721 ntBASIC2.35□□□□□ -2.03
ACLYP53396 AC093591.3-201ENST00000634516 308 ntBASIC2.35□□□□□ -2.03
ACLYP53396 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
ACLYP53396 AC009902.3-201ENST00000606235 2172 ntBASIC2.34□□□□□ -2.03
ACLYP53396 ZNF355P-201ENST00000427301 3216 ntBASIC2.34□□□□□ -2.03
ACLYP53396 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
ACLYP53396 Y_RNA.4-201ENST00000362333 112 ntBASIC2.34□□□□□ -2.03
ACLYP53396 RNU6-777P-201ENST00000364265 104 ntBASIC2.34□□□□□ -2.03
ACLYP53396 SNORA48.3-201ENST00000391081 134 ntBASIC2.34□□□□□ -2.03
ACLYP53396 CCNG1P1-201ENST00000406783 885 ntBASIC2.34□□□□□ -2.03
ACLYP53396 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.34□□□□□ -2.03
ACLYP53396 AC023141.4-201ENST00000412031 328 ntBASIC2.34□□□□□ -2.03
ACLYP53396 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.34□□□□□ -2.03
ACLYP53396 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.34□□□□□ -2.03
ACLYP53396 EEF1E1P1-201ENST00000446998 430 ntBASIC2.34□□□□□ -2.03
ACLYP53396 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.34□□□□□ -2.03
ACLYP53396 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.34□□□□□ -2.03
ACLYP53396 AC233279.1-201ENST00000455300 423 ntBASIC2.34□□□□□ -2.03
ACLYP53396 AC108729.1-201ENST00000487812 947 ntBASIC2.34□□□□□ -2.03
ACLYP53396 AC090096.1-201ENST00000489168 390 ntBASIC2.34□□□□□ -2.03
ACLYP53396 AL160314.1-201ENST00000490836 438 ntBASIC2.34□□□□□ -2.03
ACLYP53396 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.34□□□□□ -2.03
ACLYP53396 AC021146.8-201ENST00000507455 733 ntBASIC2.34□□□□□ -2.03
ACLYP53396 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.34□□□□□ -2.03
ACLYP53396 SNORA31.18-201ENST00000517043 134 ntBASIC2.34□□□□□ -2.03
ACLYP53396 SCARNA11.3-201ENST00000517276 130 ntBASIC2.34□□□□□ -2.03
ACLYP53396 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.34□□□□□ -2.03
ACLYP53396 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.34□□□□□ -2.03
ACLYP53396 MIR3616-201ENST00000584070 92 ntBASIC2.34□□□□□ -2.03
ACLYP53396 AL645944.1-201ENST00000603857 493 ntBASIC2.34□□□□□ -2.03
ACLYP53396 AC239868.4-201ENST00000608318 671 ntBASIC2.34□□□□□ -2.03
ACLYP53396 AC107075.1-201ENST00000613695 314 ntBASIC2.34□□□□□ -2.03
ACLYP53396 AC068057.2-201ENST00000624047 895 ntBASIC2.34□□□□□ -2.03
ACLYP53396 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.34□□□□□ -2.03
ACLYP53396 CU459211.1-201ENST00000635667 749 ntBASIC2.34□□□□□ -2.03
ACLYP53396 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
ACLYP53396 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
ACLYP53396 Y_RNA.164-201ENST00000363709 102 ntBASIC2.33□□□□□ -2.04
ACLYP53396 Y_RNA.192-201ENST00000363977 102 ntBASIC2.33□□□□□ -2.04
ACLYP53396 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.33□□□□□ -2.04
ACLYP53396 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.33□□□□□ -2.04
ACLYP53396 USP9YP33-201ENST00000412220 421 ntBASIC2.33□□□□□ -2.04
ACLYP53396 MTATP6P20-201ENST00000414147 562 ntBASIC2.33□□□□□ -2.04
ACLYP53396 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.33□□□□□ -2.04
ACLYP53396 ISCA1P6-201ENST00000427740 390 ntBASIC2.33□□□□□ -2.04
ACLYP53396 ATP5F1P1-201ENST00000433775 569 ntBASIC2.33□□□□□ -2.04
ACLYP53396 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.33□□□□□ -2.04
ACLYP53396 RPS25P9-201ENST00000435591 252 ntBASIC2.33□□□□□ -2.04
ACLYP53396 USP9YP35-201ENST00000435696 412 ntBASIC2.33□□□□□ -2.04
ACLYP53396 EEF1A1P39-201ENST00000440791 250 ntBASIC2.33□□□□□ -2.04
ACLYP53396 MTCO3P45-201ENST00000443036 613 ntBASIC2.33□□□□□ -2.04
ACLYP53396 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
ACLYP53396 TPT1P14-201ENST00000448018 505 ntBASIC2.33□□□□□ -2.04
ACLYP53396 AL118520.1-201ENST00000450770 291 ntBASIC2.33□□□□□ -2.04
ACLYP53396 RPL21P134-201ENST00000453468 483 ntBASIC2.33□□□□□ -2.04
ACLYP53396 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.33□□□□□ -2.04
ACLYP53396 RPS15AP36-201ENST00000492022 382 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms