Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
GTF2A1P52655 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
GTF2A1P52655 RNU6-251P-201ENST00000363235 104 ntBASIC1.31□□□□□ -2.2
GTF2A1P52655 SNORA62.1-201ENST00000364287 154 ntBASIC1.31□□□□□ -2.2
GTF2A1P52655 U8.13-201ENST00000390842 128 ntBASIC1.31□□□□□ -2.2
GTF2A1P52655 RNU6-1140P-201ENST00000410517 106 ntBASIC1.31□□□□□ -2.2
GTF2A1P52655 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.31□□□□□ -2.2
GTF2A1P52655 MTND2P21-201ENST00000436242 1042 ntBASIC1.31□□□□□ -2.2
GTF2A1P52655 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.31□□□□□ -2.2
GTF2A1P52655 UBL5P3-201ENST00000475112 231 ntBASIC1.31□□□□□ -2.2
GTF2A1P52655 AC022483.1-201ENST00000514020 567 ntBASIC1.31□□□□□ -2.2
GTF2A1P52655 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.31□□□□□ -2.2
GTF2A1P52655 AC090821.2-201ENST00000523552 176 ntBASIC1.31□□□□□ -2.2
GTF2A1P52655 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.31□□□□□ -2.2
GTF2A1P52655 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.31□□□□□ -2.2
GTF2A1P52655 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.31□□□□□ -2.2
GTF2A1P52655 VN1R88P-201ENST00000596787 292 ntBASIC1.31□□□□□ -2.2
GTF2A1P52655 MIR6845-201ENST00000613182 61 ntBASIC1.31□□□□□ -2.2
GTF2A1P52655 AC092192.1-201ENST00000633154 1018 ntBASIC1.31□□□□□ -2.2
GTF2A1P52655 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.31□□□□□ -2.2
GTF2A1P52655 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.3□□□□□ -2.2
GTF2A1P52655 SNORD114-1-201ENST00000362705 72 ntBASIC1.3□□□□□ -2.2
GTF2A1P52655 RNU6-76P-201ENST00000384060 104 ntBASIC1.3□□□□□ -2.2
GTF2A1P52655 RNU6-140P-201ENST00000384566 108 ntBASIC1.3□□□□□ -2.2
GTF2A1P52655 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.3□□□□□ -2.2
GTF2A1P52655 AC007919.1-201ENST00000429380 217 ntBASIC1.3□□□□□ -2.2
GTF2A1P52655 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.3□□□□□ -2.2
GTF2A1P52655 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.3□□□□□ -2.2
GTF2A1P52655 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.3□□□□□ -2.2
GTF2A1P52655 TRBV1-201ENST00000476502 284 ntBASIC1.3□□□□□ -2.2
GTF2A1P52655 AP003066.2-201ENST00000529375 555 ntBASIC1.3□□□□□ -2.2
GTF2A1P52655 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC1.3□□□□□ -2.2
GTF2A1P52655 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.3□□□□□ -2.2
GTF2A1P52655 AC024619.4-201ENST00000580924 316 ntBASIC1.3□□□□□ -2.2
GTF2A1P52655 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.3□□□□□ -2.2
GTF2A1P52655 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.3□□□□□ -2.2
GTF2A1P52655 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.3□□□□□ -2.2
GTF2A1P52655 AL391813.1-201ENST00000603098 260 ntBASIC1.3□□□□□ -2.2
GTF2A1P52655 AP001485.1-201ENST00000604799 199 ntBASIC1.3□□□□□ -2.2
GTF2A1P52655 AP000238.1-201ENST00000608759 426 ntBASIC1.3□□□□□ -2.2
GTF2A1P52655 AL121652.1-201ENST00000608851 448 ntBASIC1.3□□□□□ -2.2
GTF2A1P52655 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.3□□□□□ -2.2
GTF2A1P52655 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
GTF2A1P52655 SNORA22-201ENST00000383907 134 ntBASIC1.29□□□□□ -2.2
GTF2A1P52655 SNORA22C-201ENST00000384614 134 ntBASIC1.29□□□□□ -2.2
GTF2A1P52655 NDUFS5P1-201ENST00000405668 289 ntBASIC1.29□□□□□ -2.2
GTF2A1P52655 RPL31P54-201ENST00000429803 370 ntBASIC1.29□□□□□ -2.2
GTF2A1P52655 TOMM22P2-201ENST00000430735 237 ntBASIC1.29□□□□□ -2.2
GTF2A1P52655 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.29□□□□□ -2.2
GTF2A1P52655 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.29□□□□□ -2.2
GTF2A1P52655 RNA5SP57-201ENST00000459463 123 ntBASIC1.29□□□□□ -2.2
GTF2A1P52655 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
GTF2A1P52655 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.29□□□□□ -2.2
GTF2A1P52655 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.29□□□□□ -2.2
GTF2A1P52655 MIR4255-201ENST00000579351 72 ntBASIC1.29□□□□□ -2.2
GTF2A1P52655 AF131215.7-201ENST00000602443 707 ntBASIC1.29□□□□□ -2.2
GTF2A1P52655 AC018638.7-201ENST00000605836 1114 ntBASIC1.29□□□□□ -2.2
GTF2A1P52655 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.29□□□□□ -2.2
GTF2A1P52655 AL138478.1-201ENST00000612252 832 ntBASIC1.29□□□□□ -2.2
GTF2A1P52655 AC009233.1-201ENST00000616477 371 ntBASIC1.29□□□□□ -2.2
GTF2A1P52655 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.29□□□□□ -2.2
GTF2A1P52655 AC087821.2-201ENST00000637086 450 ntBASIC1.29□□□□□ -2.2
GTF2A1P52655 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.28□□□□□ -2.2
GTF2A1P52655 CBX3P1-201ENST00000325243 554 ntBASIC1.28□□□□□ -2.2
GTF2A1P52655 RNU6-741P-201ENST00000383889 107 ntBASIC1.28□□□□□ -2.2
GTF2A1P52655 SNORA51.6-201ENST00000384151 125 ntBASIC1.28□□□□□ -2.2
GTF2A1P52655 MIR30A-201ENST00000385092 71 ntBASIC1.28□□□□□ -2.2
GTF2A1P52655 SNORA40.19-201ENST00000390846 128 ntBASIC1.28□□□□□ -2.2
GTF2A1P52655 RPL23AP29-201ENST00000397284 453 ntBASIC1.28□□□□□ -2.2
GTF2A1P52655 AL121978.1-201ENST00000402778 359 ntBASIC1.28□□□□□ -2.2
GTF2A1P52655 RPS24P7-201ENST00000416921 246 ntBASIC1.28□□□□□ -2.2
GTF2A1P52655 MRPL35P3-201ENST00000421557 364 ntBASIC1.28□□□□□ -2.2
GTF2A1P52655 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.28□□□□□ -2.2
GTF2A1P52655 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.28□□□□□ -2.2
GTF2A1P52655 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.28□□□□□ -2.2
GTF2A1P52655 AC008379.1-201ENST00000463655 464 ntBASIC1.28□□□□□ -2.2
GTF2A1P52655 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.28□□□□□ -2.2
GTF2A1P52655 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
GTF2A1P52655 CKS1BP2-201ENST00000497342 240 ntBASIC1.28□□□□□ -2.2
GTF2A1P52655 AC098799.1-201ENST00000504752 800 ntBASIC1.28□□□□□ -2.2
GTF2A1P52655 AC010486.1-201ENST00000511793 424 ntBASIC1.28□□□□□ -2.2
GTF2A1P52655 MRPS33P3-201ENST00000513456 322 ntBASIC1.28□□□□□ -2.2
GTF2A1P52655 snoZ278.1-201ENST00000517059 112 ntBASIC1.28□□□□□ -2.2
GTF2A1P52655 SNORA31.22-201ENST00000517204 135 ntBASIC1.28□□□□□ -2.2
GTF2A1P52655 HSPA8P13-201ENST00000523715 472 ntBASIC1.28□□□□□ -2.2
GTF2A1P52655 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.28□□□□□ -2.2
GTF2A1P52655 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.28□□□□□ -2.2
GTF2A1P52655 FTX_3.1-201ENST00000610451 147 ntBASIC1.28□□□□□ -2.2
GTF2A1P52655 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.28□□□□□ -2.2
GTF2A1P52655 AC007490.1-201ENST00000624321 703 ntBASIC1.28□□□□□ -2.2
GTF2A1P52655 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
GTF2A1P52655 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
GTF2A1P52655 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.27□□□□□ -2.21
GTF2A1P52655 RNU6-486P-201ENST00000363116 107 ntBASIC1.27□□□□□ -2.21
GTF2A1P52655 RNU6-252P-201ENST00000363232 107 ntBASIC1.27□□□□□ -2.21
GTF2A1P52655 MIR888-201ENST00000401186 77 ntBASIC1.27□□□□□ -2.21
GTF2A1P52655 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
GTF2A1P52655 AL354695.1-201ENST00000427935 228 ntBASIC1.27□□□□□ -2.21
GTF2A1P52655 RAD1P2-201ENST00000446414 663 ntBASIC1.27□□□□□ -2.21
GTF2A1P52655 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms