Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 BX679664.1-201ENST00000434429 253 ntBASIC3.24□□□□□ -1.89
CLCNKAP51800 RPS20P5-201ENST00000434808 360 ntBASIC3.24□□□□□ -1.89
CLCNKAP51800 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.24□□□□□ -1.89
CLCNKAP51800 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.24□□□□□ -1.89
CLCNKAP51800 AC092989.1-201ENST00000481235 277 ntBASIC3.24□□□□□ -1.89
CLCNKAP51800 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.24□□□□□ -1.89
CLCNKAP51800 AL049874.1-201ENST00000489560 388 ntBASIC3.24□□□□□ -1.89
CLCNKAP51800 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.24□□□□□ -1.89
CLCNKAP51800 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.24□□□□□ -1.89
CLCNKAP51800 GMPSP1-201ENST00000514075 579 ntBASIC3.24□□□□□ -1.89
CLCNKAP51800 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.24□□□□□ -1.89
CLCNKAP51800 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.24□□□□□ -1.89
CLCNKAP51800 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.24□□□□□ -1.89
CLCNKAP51800 AC093012.1-202ENST00000549403 582 ntBASIC3.24□□□□□ -1.89
CLCNKAP51800 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.24□□□□□ -1.89
CLCNKAP51800 AL512360.1-201ENST00000555346 234 ntBASIC3.24□□□□□ -1.89
CLCNKAP51800 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.24□□□□□ -1.89
CLCNKAP51800 AC092325.1-201ENST00000566449 554 ntBASIC3.24□□□□□ -1.89
CLCNKAP51800 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.24□□□□□ -1.89
CLCNKAP51800 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.24□□□□□ -1.89
CLCNKAP51800 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.24□□□□□ -1.89
CLCNKAP51800 AL133393.1-201ENST00000603277 287 ntBASIC3.24□□□□□ -1.89
CLCNKAP51800 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.24□□□□□ -1.89
CLCNKAP51800 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.24□□□□□ -1.89
CLCNKAP51800 DPPA3P3-201ENST00000603842 430 ntBASIC3.24□□□□□ -1.89
CLCNKAP51800 AC008536.2-201ENST00000607284 349 ntBASIC3.24□□□□□ -1.89
CLCNKAP51800 AL442067.2-201ENST00000614033 363 ntBASIC3.24□□□□□ -1.89
CLCNKAP51800 SDR42E1P2-201ENST00000614861 481 ntBASIC3.24□□□□□ -1.89
CLCNKAP51800 MIR7112-201ENST00000616126 65 ntBASIC3.24□□□□□ -1.89
CLCNKAP51800 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.24□□□□□ -1.89
CLCNKAP51800 AP003122.6-201ENST00000623831 495 ntBASIC3.24□□□□□ -1.89
CLCNKAP51800 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.24□□□□□ -1.89
CLCNKAP51800 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLCNKAP51800 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CLCNKAP51800 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLCNKAP51800 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLCNKAP51800 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.24□□□□□ -1.89
CLCNKAP51800 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.24□□□□□ -1.89
CLCNKAP51800 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.23□□□□□ -1.89
CLCNKAP51800 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CLCNKAP51800 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLCNKAP51800 Y_RNA.9-201ENST00000362354 101 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 RPS4XP8-201ENST00000402039 771 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 CIR1P3-201ENST00000405137 479 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 NDUFS5P1-201ENST00000405668 289 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 RNU6-55P-201ENST00000411092 107 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 RNU6-954P-201ENST00000411355 107 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.23□□□□□ -1.89
CLCNKAP51800 MTND1P23-201ENST00000416931 372 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 HSPE1P1-201ENST00000421494 318 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.23□□□□□ -1.89
CLCNKAP51800 TIMM9P3-201ENST00000428659 274 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.23□□□□□ -1.89
CLCNKAP51800 MRPS10P2-201ENST00000431226 381 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 USP12PX-201ENST00000432383 1057 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 AL596276.1-201ENST00000434465 418 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 MTATP6P16-201ENST00000434543 526 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 RPS3AP12-201ENST00000443616 753 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 RPL23AP20-201ENST00000447965 421 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 ELOCP23-201ENST00000452014 332 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 BX510359.1-201ENST00000456973 237 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 SNORD97-201ENST00000459187 142 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 HSPE1P6-201ENST00000479457 291 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 AC092185.1-201ENST00000491371 97 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 Y_RNA.693-201ENST00000516641 110 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 RNU6-1092P-201ENST00000516955 87 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.23□□□□□ -1.89
CLCNKAP51800 OR5AQ1P-201ENST00000527596 927 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 AP001646.1-201ENST00000527936 915 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 OR4R1P-201ENST00000529879 463 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 AP003034.1-201ENST00000534621 422 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.23□□□□□ -1.89
CLCNKAP51800 AL359212.1-201ENST00000556608 614 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.23□□□□□ -1.89
CLCNKAP51800 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLCNKAP51800 MIR5680-201ENST00000577577 84 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 MIR4801-201ENST00000582704 82 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.23□□□□□ -1.89
CLCNKAP51800 AP001330.5-201ENST00000607176 411 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.23□□□□□ -1.89
CLCNKAP51800 AL157817.1-201ENST00000614264 790 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 AL589994.2-201ENST00000621124 579 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 MIR3651-201ENST00000630427 90 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CLCNKAP51800 MIR4275-201ENST00000636486 87 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 MIR3688-2-201ENST00000636963 87 ntBASIC3.23□□□□□ -1.89
CLCNKAP51800 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLCNKAP51800 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLCNKAP51800 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.23□□□□□ -1.89
CLCNKAP51800 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLCNKAP51800 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLCNKAP51800 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CLCNKAP51800 AC093010.3-201ENST00000570269 15214 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLCNKAP51800 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLCNKAP51800 RNU6-1120P-201ENST00000362988 108 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 SNORA38.1-201ENST00000364172 131 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 RNU6-701P-201ENST00000384059 107 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 SNORA1.3-201ENST00000384676 136 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 RNU2-39P-201ENST00000410604 198 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms