Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.38□□□□□ -2.19
RPL28P46779 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.38□□□□□ -2.19
RPL28P46779 RNA5SP281-201ENST00000516504 135 ntBASIC1.38□□□□□ -2.19
RPL28P46779 HMGN1P28-201ENST00000521340 364 ntBASIC1.38□□□□□ -2.19
RPL28P46779 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.38□□□□□ -2.19
RPL28P46779 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.38□□□□□ -2.19
RPL28P46779 CYCSP2-201ENST00000558168 301 ntBASIC1.38□□□□□ -2.19
RPL28P46779 AC012435.1-202ENST00000568772 240 ntBASIC1.38□□□□□ -2.19
RPL28P46779 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.38□□□□□ -2.19
RPL28P46779 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.38□□□□□ -2.19
RPL28P46779 AC012493.3-201ENST00000604494 112 ntBASIC1.38□□□□□ -2.19
RPL28P46779 AC068276.1-201ENST00000605793 379 ntBASIC1.38□□□□□ -2.19
RPL28P46779 SDR42E1P4-201ENST00000620894 481 ntBASIC1.38□□□□□ -2.19
RPL28P46779 IGHVIII-44-202ENST00000636235 289 ntBASIC1.38□□□□□ -2.19
RPL28P46779 AC091948.2-201ENST00000636510 279 ntBASIC1.38□□□□□ -2.19
RPL28P46779 AL354685.2-201ENST00000448218 1447 ntBASIC1.38□□□□□ -2.19
RPL28P46779 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
RPL28P46779 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.37□□□□□ -2.19
RPL28P46779 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.37□□□□□ -2.19
RPL28P46779 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.37□□□□□ -2.19
RPL28P46779 AC092447.10-201ENST00000620607 1652 ntBASIC1.37□□□□□ -2.19
RPL28P46779 U3.12-201ENST00000364498 214 ntBASIC1.37□□□□□ -2.19
RPL28P46779 UBE2V1P2-201ENST00000397758 440 ntBASIC1.37□□□□□ -2.19
RPL28P46779 SNORA11.4-201ENST00000408823 129 ntBASIC1.37□□□□□ -2.19
RPL28P46779 RNU4-53P-201ENST00000410828 140 ntBASIC1.37□□□□□ -2.19
RPL28P46779 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.37□□□□□ -2.19
RPL28P46779 MRPS36P1-201ENST00000421291 307 ntBASIC1.37□□□□□ -2.19
RPL28P46779 AL356320.1-201ENST00000429616 163 ntBASIC1.37□□□□□ -2.19
RPL28P46779 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.37□□□□□ -2.19
RPL28P46779 NANOGP2-201ENST00000435391 727 ntBASIC1.37□□□□□ -2.19
RPL28P46779 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.37□□□□□ -2.19
RPL28P46779 RPL35AP22-201ENST00000436855 335 ntBASIC1.37□□□□□ -2.19
RPL28P46779 MTND5P14-201ENST00000441481 1267 ntBASIC1.37□□□□□ -2.19
RPL28P46779 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
RPL28P46779 MTND1P31-201ENST00000449206 961 ntBASIC1.37□□□□□ -2.19
RPL28P46779 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.37□□□□□ -2.19
RPL28P46779 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.37□□□□□ -2.19
RPL28P46779 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.37□□□□□ -2.19
RPL28P46779 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
RPL28P46779 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.37□□□□□ -2.19
RPL28P46779 AC096571.1-202ENST00000506634 735 ntBASIC1.37□□□□□ -2.19
RPL28P46779 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.37□□□□□ -2.19
RPL28P46779 MRPS33P3-201ENST00000513456 322 ntBASIC1.37□□□□□ -2.19
RPL28P46779 RNA5SP112-201ENST00000515937 99 ntBASIC1.37□□□□□ -2.19
RPL28P46779 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.37□□□□□ -2.19
RPL28P46779 AP003049.1-201ENST00000529418 457 ntBASIC1.37□□□□□ -2.19
RPL28P46779 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.37□□□□□ -2.19
RPL28P46779 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
RPL28P46779 AC104072.1-201ENST00000568817 668 ntBASIC1.37□□□□□ -2.19
RPL28P46779 AC007229.1-201ENST00000590455 412 ntBASIC1.37□□□□□ -2.19
RPL28P46779 AL109918.3-201ENST00000603072 338 ntBASIC1.37□□□□□ -2.19
RPL28P46779 AL096840.1-201ENST00000603287 93 ntBASIC1.37□□□□□ -2.19
RPL28P46779 AL138963.2-201ENST00000605137 226 ntBASIC1.37□□□□□ -2.19
RPL28P46779 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.37□□□□□ -2.19
RPL28P46779 AC009233.1-201ENST00000616477 371 ntBASIC1.37□□□□□ -2.19
RPL28P46779 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
RPL28P46779 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
RPL28P46779 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.37□□□□□ -2.19
RPL28P46779 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.37□□□□□ -2.19
RPL28P46779 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
RPL28P46779 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
RPL28P46779 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
RPL28P46779 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
RPL28P46779 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
RPL28P46779 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
RPL28P46779 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
RPL28P46779 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
RPL28P46779 RNA5SP489-201ENST00000410986 109 ntBASIC1.36□□□□□ -2.19
RPL28P46779 RNA5SP508-201ENST00000411327 119 ntBASIC1.36□□□□□ -2.19
RPL28P46779 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.36□□□□□ -2.19
RPL28P46779 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.36□□□□□ -2.19
RPL28P46779 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.36□□□□□ -2.19
RPL28P46779 AL139413.1-201ENST00000421309 217 ntBASIC1.36□□□□□ -2.19
RPL28P46779 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.36□□□□□ -2.19
RPL28P46779 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.36□□□□□ -2.19
RPL28P46779 Z98742.2-201ENST00000431564 187 ntBASIC1.36□□□□□ -2.19
RPL28P46779 AL161651.1-201ENST00000440882 223 ntBASIC1.36□□□□□ -2.19
RPL28P46779 MTCO3P45-201ENST00000443036 613 ntBASIC1.36□□□□□ -2.19
RPL28P46779 AC020550.1-201ENST00000447385 163 ntBASIC1.36□□□□□ -2.19
RPL28P46779 AC017099.1-201ENST00000448261 1028 ntBASIC1.36□□□□□ -2.19
RPL28P46779 AL118520.1-201ENST00000450770 291 ntBASIC1.36□□□□□ -2.19
RPL28P46779 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.36□□□□□ -2.19
RPL28P46779 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.36□□□□□ -2.19
RPL28P46779 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.36□□□□□ -2.19
RPL28P46779 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.36□□□□□ -2.19
RPL28P46779 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.36□□□□□ -2.19
RPL28P46779 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.36□□□□□ -2.19
RPL28P46779 MTND5P13-201ENST00000513046 1079 ntBASIC1.36□□□□□ -2.19
RPL28P46779 AC110760.3-202ENST00000515177 371 ntBASIC1.36□□□□□ -2.19
RPL28P46779 RNU2-44P-201ENST00000516795 194 ntBASIC1.36□□□□□ -2.19
RPL28P46779 RNA5SP165-201ENST00000517142 115 ntBASIC1.36□□□□□ -2.19
RPL28P46779 AP003355.1-201ENST00000518956 587 ntBASIC1.36□□□□□ -2.19
RPL28P46779 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.36□□□□□ -2.19
RPL28P46779 SNRPGP18-201ENST00000553000 214 ntBASIC1.36□□□□□ -2.19
RPL28P46779 AC027176.1-201ENST00000560204 514 ntBASIC1.36□□□□□ -2.19
RPL28P46779 ROCK1P1-201ENST00000573767 549 ntBASIC1.36□□□□□ -2.19
RPL28P46779 MIR4529-201ENST00000578110 78 ntBASIC1.36□□□□□ -2.19
RPL28P46779 NRBF2P1-201ENST00000587407 859 ntBASIC1.36□□□□□ -2.19
RPL28P46779 AF038458.1-201ENST00000588406 262 ntBASIC1.36□□□□□ -2.19
RPL28P46779 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms