Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.83□□□□□ -1.96
NKX2-1P43699 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.83□□□□□ -1.96
NKX2-1P43699 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NKX2-1P43699 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NKX2-1P43699 AP004289.2-201ENST00000444413 1457 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
NKX2-1P43699 MFSD8-233ENST00000641482 4860 ntBASIC2.82□□□□□ -1.96
NKX2-1P43699 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
NKX2-1P43699 CKAP2P1-201ENST00000555477 2049 ntBASIC2.82□□□□□ -1.96
NKX2-1P43699 UBE2L2-201ENST00000254302 429 ntBASIC2.82□□□□□ -1.96
NKX2-1P43699 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NKX2-1P43699 RNU6-270P-201ENST00000364131 105 ntBASIC2.82□□□□□ -1.96
NKX2-1P43699 RNU6-61P-201ENST00000365528 109 ntBASIC2.82□□□□□ -1.96
NKX2-1P43699 RNA5SP283-201ENST00000365604 119 ntBASIC2.82□□□□□ -1.96
NKX2-1P43699 RNU6-946P-201ENST00000383878 107 ntBASIC2.82□□□□□ -1.96
NKX2-1P43699 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
NKX2-1P43699 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.82□□□□□ -1.96
NKX2-1P43699 AL139397.2-201ENST00000404529 772 ntBASIC2.82□□□□□ -1.96
NKX2-1P43699 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.82□□□□□ -1.96
NKX2-1P43699 CALM2P2-201ENST00000428512 440 ntBASIC2.82□□□□□ -1.96
NKX2-1P43699 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.82□□□□□ -1.96
NKX2-1P43699 AC016691.1-201ENST00000441321 413 ntBASIC2.82□□□□□ -1.96
NKX2-1P43699 Z99127.3-201ENST00000448158 395 ntBASIC2.82□□□□□ -1.96
NKX2-1P43699 FABP5P15-201ENST00000453566 214 ntBASIC2.82□□□□□ -1.96
NKX2-1P43699 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.82□□□□□ -1.96
NKX2-1P43699 AC010265.1-201ENST00000513509 211 ntBASIC2.82□□□□□ -1.96
NKX2-1P43699 RNU6-685P-201ENST00000517088 95 ntBASIC2.82□□□□□ -1.96
NKX2-1P43699 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
NKX2-1P43699 AP000867.2-201ENST00000532468 320 ntBASIC2.82□□□□□ -1.96
NKX2-1P43699 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.82□□□□□ -1.96
NKX2-1P43699 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.82□□□□□ -1.96
NKX2-1P43699 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.82□□□□□ -1.96
NKX2-1P43699 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.82□□□□□ -1.96
NKX2-1P43699 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.82□□□□□ -1.96
NKX2-1P43699 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.82□□□□□ -1.96
NKX2-1P43699 MIR5187-201ENST00000583479 76 ntBASIC2.82□□□□□ -1.96
NKX2-1P43699 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.82□□□□□ -1.96
NKX2-1P43699 AL162413.1-201ENST00000603198 110 ntBASIC2.82□□□□□ -1.96
NKX2-1P43699 AC007621.1-201ENST00000604544 437 ntBASIC2.82□□□□□ -1.96
NKX2-1P43699 AC007619.2-201ENST00000605743 379 ntBASIC2.82□□□□□ -1.96
NKX2-1P43699 AL589994.2-201ENST00000621124 579 ntBASIC2.82□□□□□ -1.96
NKX2-1P43699 FP236240.3-201ENST00000623061 327 ntBASIC2.82□□□□□ -1.96
NKX2-1P43699 AC073476.4-201ENST00000628409 72 ntBASIC2.82□□□□□ -1.96
NKX2-1P43699 FER-210ENST00000628534 558 ntTSL 5 BASIC2.82□□□□□ -1.96
NKX2-1P43699 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.82□□□□□ -1.96
NKX2-1P43699 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.82□□□□□ -1.96
NKX2-1P43699 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NKX2-1P43699 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.82□□□□□ -1.96
NKX2-1P43699 AC006020.1-201ENST00000420179 1854 ntBASIC2.82□□□□□ -1.96
NKX2-1P43699 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.81□□□□□ -1.96
NKX2-1P43699 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
NKX2-1P43699 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NKX2-1P43699 Y_RNA.248-201ENST00000364501 109 ntBASIC2.81□□□□□ -1.96
NKX2-1P43699 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NKX2-1P43699 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.81□□□□□ -1.96
NKX2-1P43699 FGF7P8-201ENST00000402994 292 ntBASIC2.81□□□□□ -1.96
NKX2-1P43699 BTF3P7-201ENST00000407097 488 ntBASIC2.81□□□□□ -1.96
NKX2-1P43699 RNU2-29P-201ENST00000410423 189 ntBASIC2.81□□□□□ -1.96
NKX2-1P43699 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.81□□□□□ -1.96
NKX2-1P43699 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.81□□□□□ -1.96
NKX2-1P43699 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC2.81□□□□□ -1.96
NKX2-1P43699 AL139247.1-201ENST00000422768 325 ntBASIC2.81□□□□□ -1.96
NKX2-1P43699 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.81□□□□□ -1.96
NKX2-1P43699 AC004975.1-201ENST00000428733 208 ntBASIC2.81□□□□□ -1.96
NKX2-1P43699 SNRPEP9-201ENST00000436794 238 ntBASIC2.81□□□□□ -1.96
NKX2-1P43699 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.81□□□□□ -1.96
NKX2-1P43699 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.81□□□□□ -1.96
NKX2-1P43699 RPS24P13-201ENST00000442520 397 ntBASIC2.81□□□□□ -1.96
NKX2-1P43699 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.81□□□□□ -1.96
NKX2-1P43699 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.81□□□□□ -1.96
NKX2-1P43699 AP002884.2-201ENST00000471647 395 ntBASIC2.81□□□□□ -1.96
NKX2-1P43699 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.81□□□□□ -1.96
NKX2-1P43699 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.81□□□□□ -1.96
NKX2-1P43699 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.81□□□□□ -1.96
NKX2-1P43699 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.81□□□□□ -1.96
NKX2-1P43699 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.81□□□□□ -1.96
NKX2-1P43699 RANP9-201ENST00000519957 271 ntBASIC2.81□□□□□ -1.96
NKX2-1P43699 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.81□□□□□ -1.96
NKX2-1P43699 RNU1-30P-201ENST00000606575 163 ntBASIC2.81□□□□□ -1.96
NKX2-1P43699 AC093788.1-201ENST00000609356 927 ntBASIC2.81□□□□□ -1.96
NKX2-1P43699 MIR6875-201ENST00000617506 72 ntBASIC2.81□□□□□ -1.96
NKX2-1P43699 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.81□□□□□ -1.96
NKX2-1P43699 AL354798.1-201ENST00000622505 329 ntBASIC2.81□□□□□ -1.96
NKX2-1P43699 MIR6810-201ENST00000622701 70 ntBASIC2.81□□□□□ -1.96
NKX2-1P43699 API5P2-201ENST00000397055 1498 ntBASIC2.81□□□□□ -1.96
NKX2-1P43699 AC032011.1-201ENST00000611703 1549 ntBASIC2.81□□□□□ -1.96
NKX2-1P43699 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
NKX2-1P43699 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.81□□□□□ -1.96
NKX2-1P43699 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NKX2-1P43699 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
NKX2-1P43699 AC091564.4-201ENST00000533934 2194 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 MTND5P7-201ENST00000413558 1798 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
NKX2-1P43699 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
NKX2-1P43699 FTLP6-201ENST00000355274 422 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 FRG1CP-201ENST00000358464 769 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 MIR148B-201ENST00000362252 99 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 Y_RNA.255-201ENST00000364581 97 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 RNU6-1283P-201ENST00000365314 105 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 180.4 ms