Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA4P43681 RNU4-84P-201ENST00000364200 139 ntBASIC4.83□□□□□ -1.64
CHRNA4P43681 RNU6-312P-201ENST00000364629 107 ntBASIC4.83□□□□□ -1.64
CHRNA4P43681 Y_RNA.286-201ENST00000364813 102 ntBASIC4.83□□□□□ -1.64
CHRNA4P43681 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA4P43681 RNU6-1289P-201ENST00000384431 106 ntBASIC4.83□□□□□ -1.64
CHRNA4P43681 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CHRNA4P43681 AL357075.1-201ENST00000404107 726 ntBASIC4.83□□□□□ -1.64
CHRNA4P43681 RN7SKP125-201ENST00000410481 302 ntBASIC4.83□□□□□ -1.64
CHRNA4P43681 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.83□□□□□ -1.64
CHRNA4P43681 TMSB10P2-201ENST00000416049 131 ntBASIC4.83□□□□□ -1.64
CHRNA4P43681 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA4P43681 MTND4LP9-201ENST00000427694 174 ntBASIC4.83□□□□□ -1.64
CHRNA4P43681 Z95327.1-201ENST00000446082 482 ntBASIC4.83□□□□□ -1.64
CHRNA4P43681 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA4P43681 AC010631.1-201ENST00000474150 156 ntBASIC4.83□□□□□ -1.64
CHRNA4P43681 RN7SL591P-201ENST00000496150 292 ntBASIC4.83□□□□□ -1.64
CHRNA4P43681 AC091868.1-201ENST00000508746 304 ntBASIC4.83□□□□□ -1.64
CHRNA4P43681 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.83□□□□□ -1.64
CHRNA4P43681 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.83□□□□□ -1.64
CHRNA4P43681 AC133555.2-201ENST00000550213 292 ntBASIC4.83□□□□□ -1.64
CHRNA4P43681 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.83□□□□□ -1.64
CHRNA4P43681 MIR5699-201ENST00000578903 90 ntBASIC4.83□□□□□ -1.64
CHRNA4P43681 MIR4646-201ENST00000580775 63 ntBASIC4.83□□□□□ -1.64
CHRNA4P43681 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.83□□□□□ -1.64
CHRNA4P43681 AC024940.4-201ENST00000605507 246 ntBASIC4.83□□□□□ -1.64
CHRNA4P43681 FAM27B-201ENST00000610601 213 ntBASIC4.83□□□□□ -1.64
CHRNA4P43681 AC011476.5-201ENST00000615594 130 ntBASIC4.83□□□□□ -1.64
CHRNA4P43681 CR381572.2-201ENST00000624852 397 ntBASIC4.83□□□□□ -1.64
CHRNA4P43681 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA4P43681 RAD17P1-201ENST00000418130 2042 ntBASIC4.83□□□□□ -1.64
CHRNA4P43681 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CHRNA4P43681 SMG1P6-201ENST00000532337 2930 ntBASIC4.83□□□□□ -1.64
CHRNA4P43681 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.83□□□□□ -1.64
CHRNA4P43681 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA4P43681 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA4P43681 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA4P43681 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA4P43681 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.82□□□□□ -1.64
CHRNA4P43681 AL672167.1-203ENST00000641299 2975 ntBASIC4.82□□□□□ -1.64
CHRNA4P43681 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA4P43681 RNU6-151P-201ENST00000364158 107 ntBASIC4.82□□□□□ -1.64
CHRNA4P43681 RNU6-818P-201ENST00000364837 108 ntBASIC4.82□□□□□ -1.64
CHRNA4P43681 Y_RNA.309-201ENST00000365046 111 ntBASIC4.82□□□□□ -1.64
CHRNA4P43681 RNU6-514P-201ENST00000384208 107 ntBASIC4.82□□□□□ -1.64
CHRNA4P43681 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CHRNA4P43681 RNU1-82P-201ENST00000390851 165 ntBASIC4.82□□□□□ -1.64
CHRNA4P43681 SNORA12.2-201ENST00000391040 156 ntBASIC4.82□□□□□ -1.64
CHRNA4P43681 AL645733.1-201ENST00000402250 217 ntBASIC4.82□□□□□ -1.64
CHRNA4P43681 RPL36AP10-201ENST00000421785 322 ntBASIC4.82□□□□□ -1.64
CHRNA4P43681 AC004938.1-201ENST00000438468 308 ntBASIC4.82□□□□□ -1.64
CHRNA4P43681 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.82□□□□□ -1.64
CHRNA4P43681 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.82□□□□□ -1.64
CHRNA4P43681 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.82□□□□□ -1.64
CHRNA4P43681 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA4P43681 AP001025.1-201ENST00000486139 332 ntBASIC4.82□□□□□ -1.64
CHRNA4P43681 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.82□□□□□ -1.64
CHRNA4P43681 MTND3P25-201ENST00000509243 135 ntBASIC4.82□□□□□ -1.64
CHRNA4P43681 RNU6-1234P-201ENST00000516877 103 ntBASIC4.82□□□□□ -1.64
CHRNA4P43681 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.82□□□□□ -1.64
CHRNA4P43681 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.82□□□□□ -1.64
CHRNA4P43681 TGIF1P1-201ENST00000558095 802 ntBASIC4.82□□□□□ -1.64
CHRNA4P43681 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
CHRNA4P43681 MIR548X2-201ENST00000579776 100 ntBASIC4.82□□□□□ -1.64
CHRNA4P43681 MIR4436B2-201ENST00000581415 91 ntBASIC4.82□□□□□ -1.64
CHRNA4P43681 MIR4436B1-201ENST00000583272 91 ntBASIC4.82□□□□□ -1.64
CHRNA4P43681 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.82□□□□□ -1.64
CHRNA4P43681 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.82□□□□□ -1.64
CHRNA4P43681 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CHRNA4P43681 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA4P43681 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA4P43681 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA4P43681 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CHRNA4P43681 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA4P43681 AL445487.1-201ENST00000415694 1580 ntBASIC4.82□□□□□ -1.64
CHRNA4P43681 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.82□□□□□ -1.64
CHRNA4P43681 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA4P43681 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA4P43681 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA4P43681 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
CHRNA4P43681 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA4P43681 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.81□□□□□ -1.64
CHRNA4P43681 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA4P43681 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.81□□□□□ -1.64
CHRNA4P43681 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.81□□□□□ -1.64
CHRNA4P43681 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA4P43681 RPL9P7-201ENST00000330965 580 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 Y_RNA.262-201ENST00000364641 102 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA4P43681 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA4P43681 MIR521-1-201ENST00000384902 87 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CHRNA4P43681 AL592291.1-201ENST00000403830 352 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 RNU4-65P-201ENST00000410473 140 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 RNU6-607P-201ENST00000411283 108 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 AC114755.2-201ENST00000413520 361 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 AL358453.1-201ENST00000422522 250 ntBASIC4.81□□□□□ -1.64
CHRNA4P43681 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA4P43681 AL513043.1-201ENST00000439124 535 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms