Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 AC009812.4-201ENST00000569134 1805 ntBASIC1.89□□□□□ -2.11
COL18A1P39060 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL18A1P39060 AC093536.2-201ENST00000565257 1406 ntBASIC1.88□□□□□ -2.11
COL18A1P39060 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
COL18A1P39060 Y_RNA.25-201ENST00000362528 102 ntBASIC1.88□□□□□ -2.11
COL18A1P39060 MIR627-201ENST00000384979 97 ntBASIC1.88□□□□□ -2.11
COL18A1P39060 RNU2-43P-201ENST00000410306 190 ntBASIC1.88□□□□□ -2.11
COL18A1P39060 Z85995.1-201ENST00000415547 335 ntBASIC1.88□□□□□ -2.11
COL18A1P39060 AL365400.1-201ENST00000431854 640 ntBASIC1.88□□□□□ -2.11
COL18A1P39060 MTND2P5-201ENST00000432656 1006 ntBASIC1.88□□□□□ -2.11
COL18A1P39060 AC092573.2-201ENST00000434546 243 ntBASIC1.88□□□□□ -2.11
COL18A1P39060 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.88□□□□□ -2.11
COL18A1P39060 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.88□□□□□ -2.11
COL18A1P39060 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.88□□□□□ -2.11
COL18A1P39060 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.88□□□□□ -2.11
COL18A1P39060 AF131216.2-201ENST00000512316 564 ntBASIC1.88□□□□□ -2.11
COL18A1P39060 RNU5A-7P-201ENST00000515979 116 ntBASIC1.88□□□□□ -2.11
COL18A1P39060 MTCO1P47-201ENST00000523889 1271 ntBASIC1.88□□□□□ -2.11
COL18A1P39060 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.88□□□□□ -2.11
COL18A1P39060 HMGB1P14-201ENST00000557424 591 ntBASIC1.88□□□□□ -2.11
COL18A1P39060 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.88□□□□□ -2.11
COL18A1P39060 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.88□□□□□ -2.11
COL18A1P39060 AC105224.1-201ENST00000587055 421 ntBASIC1.88□□□□□ -2.11
COL18A1P39060 AL078603.1-201ENST00000603824 313 ntBASIC1.88□□□□□ -2.11
COL18A1P39060 AC126118.1-201ENST00000607744 628 ntBASIC1.88□□□□□ -2.11
COL18A1P39060 AC084824.5-201ENST00000612009 413 ntBASIC1.88□□□□□ -2.11
COL18A1P39060 AC068880.4-201ENST00000623082 495 ntBASIC1.88□□□□□ -2.11
COL18A1P39060 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.88□□□□□ -2.11
COL18A1P39060 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
COL18A1P39060 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.88□□□□□ -2.11
COL18A1P39060 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
COL18A1P39060 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.87□□□□□ -2.11
COL18A1P39060 RNA5SP393-201ENST00000363423 117 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 RNU4-51P-201ENST00000364206 140 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 MIR135A2-201ENST00000384854 100 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 AL592310.1-201ENST00000414330 671 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 AC027644.1-201ENST00000419595 298 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.87□□□□□ -2.11
COL18A1P39060 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.87□□□□□ -2.11
COL18A1P39060 SEPT7P5-201ENST00000434048 306 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 AC090774.1-201ENST00000435925 246 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 RPS15AP7-201ENST00000439294 405 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 snoU13.28-201ENST00000459235 104 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 AL049714.1-201ENST00000466686 347 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 AC092991.1-201ENST00000477176 376 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 RPPH1-2P-201ENST00000516688 293 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.87□□□□□ -2.11
COL18A1P39060 AC104417.1-201ENST00000523974 751 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
COL18A1P39060 AC011604.1-201ENST00000545978 196 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 AC125611.2-201ENST00000551907 647 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 HSPE1P3-201ENST00000559254 309 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.87□□□□□ -2.11
COL18A1P39060 LARP7P2-201ENST00000575306 125 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 MIR4446-201ENST00000578505 67 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 AC005776.1-201ENST00000603164 290 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 AL360085.1-201ENST00000604713 532 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 DUXAP10-204ENST00000612052 616 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
COL18A1P39060 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 AC110079.1-202ENST00000635213 138 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 AC011477.1-204ENST00000623416 1325 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.87□□□□□ -2.11
COL18A1P39060 RNU6-216P-201ENST00000363282 104 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 RNU6-657P-201ENST00000383904 107 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
COL18A1P39060 MIR1304-201ENST00000408243 91 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 DPRXP1-201ENST00000426312 460 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 RPL7L1P10-201ENST00000427790 463 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 AC093155.1-201ENST00000440164 826 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 RPL39P6-201ENST00000448289 150 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 OFD1P3Y-201ENST00000453312 783 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 PNPLA4P1-201ENST00000458328 305 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 SNORD121B-201ENST00000458838 81 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.87□□□□□ -2.11
COL18A1P39060 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
COL18A1P39060 AC135279.1-201ENST00000543493 504 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.87□□□□□ -2.11
COL18A1P39060 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.87□□□□□ -2.11
COL18A1P39060 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.87□□□□□ -2.11
COL18A1P39060 AP000254.1-201ENST00000609934 520 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 AL592148.2-201ENST00000612210 372 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 AC025588.4-201ENST00000615802 908 ntBASIC1.87□□□□□ -2.11
COL18A1P39060 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
COL18A1P39060 MAPK10-266ENST00000641066 6555 ntBASIC1.86□□□□□ -2.11
COL18A1P39060 RNU1-105P-201ENST00000363470 161 ntBASIC1.86□□□□□ -2.11
COL18A1P39060 RPL22P22-201ENST00000395439 379 ntBASIC1.86□□□□□ -2.11
COL18A1P39060 RPL7P27-201ENST00000403775 720 ntBASIC1.86□□□□□ -2.11
COL18A1P39060 MTATP6P27-201ENST00000416987 621 ntBASIC1.86□□□□□ -2.11
COL18A1P39060 AC018630.2-202ENST00000422992 927 ntBASIC1.86□□□□□ -2.11
COL18A1P39060 AL590233.1-201ENST00000430017 456 ntBASIC1.86□□□□□ -2.11
COL18A1P39060 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.86□□□□□ -2.11
COL18A1P39060 RNF2P1-201ENST00000442955 1010 ntBASIC1.86□□□□□ -2.11
COL18A1P39060 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.86□□□□□ -2.11
COL18A1P39060 COX6CP12-201ENST00000446748 202 ntBASIC1.86□□□□□ -2.11
COL18A1P39060 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.86□□□□□ -2.11
COL18A1P39060 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.86□□□□□ -2.11
COL18A1P39060 AC135721.1-201ENST00000497954 479 ntBASIC1.86□□□□□ -2.11
COL18A1P39060 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms