Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
HOXD13P35453 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.21□□□□□ -1.9
HOXD13P35453 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.21□□□□□ -1.9
HOXD13P35453 U8.3-201ENST00000363321 132 ntBASIC3.21□□□□□ -1.9
HOXD13P35453 Y_RNA.333-201ENST00000365274 102 ntBASIC3.21□□□□□ -1.9
HOXD13P35453 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HOXD13P35453 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HOXD13P35453 RNU6-946P-201ENST00000383878 107 ntBASIC3.21□□□□□ -1.9
HOXD13P35453 RNU6-14P-201ENST00000384630 106 ntBASIC3.21□□□□□ -1.9
HOXD13P35453 SNORA48.5-201ENST00000391143 135 ntBASIC3.21□□□□□ -1.9
HOXD13P35453 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.21□□□□□ -1.9
HOXD13P35453 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXD13P35453 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.21□□□□□ -1.9
HOXD13P35453 AC007283.2-201ENST00000424739 197 ntBASIC3.21□□□□□ -1.9
HOXD13P35453 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXD13P35453 RPL23AP58-201ENST00000440453 469 ntBASIC3.21□□□□□ -1.9
HOXD13P35453 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXD13P35453 MTND1P27-201ENST00000451117 902 ntBASIC3.21□□□□□ -1.9
HOXD13P35453 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.21□□□□□ -1.9
HOXD13P35453 Y_RNA.695-201ENST00000516715 107 ntBASIC3.21□□□□□ -1.9
HOXD13P35453 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXD13P35453 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.21□□□□□ -1.9
HOXD13P35453 AC087883.1-201ENST00000551882 391 ntBASIC3.21□□□□□ -1.9
HOXD13P35453 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.21□□□□□ -1.9
HOXD13P35453 MIR3200-201ENST00000580767 85 ntBASIC3.21□□□□□ -1.9
HOXD13P35453 AL161756.2-201ENST00000604597 246 ntBASIC3.21□□□□□ -1.9
HOXD13P35453 AC011939.3-201ENST00000613686 466 ntBASIC3.21□□□□□ -1.9
HOXD13P35453 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HOXD13P35453 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.21□□□□□ -1.9
HOXD13P35453 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
HOXD13P35453 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HOXD13P35453 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HOXD13P35453 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HOXD13P35453 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.2□□□□□ -1.9
HOXD13P35453 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.2□□□□□ -1.9
HOXD13P35453 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.2□□□□□ -1.9
HOXD13P35453 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HOXD13P35453 RNU1-73P-201ENST00000383971 164 ntBASIC3.2□□□□□ -1.9
HOXD13P35453 RN7SKP142-201ENST00000411236 328 ntBASIC3.2□□□□□ -1.9
HOXD13P35453 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXD13P35453 AL358075.3-201ENST00000426289 226 ntBASIC3.2□□□□□ -1.9
HOXD13P35453 MED13P1-201ENST00000428342 171 ntBASIC3.2□□□□□ -1.9
HOXD13P35453 AC073614.1-201ENST00000438690 650 ntBASIC3.2□□□□□ -1.9
HOXD13P35453 RPS24P13-201ENST00000442520 397 ntBASIC3.2□□□□□ -1.9
HOXD13P35453 RPS15AP27-201ENST00000449183 343 ntBASIC3.2□□□□□ -1.9
HOXD13P35453 RPS29P2-201ENST00000479278 136 ntBASIC3.2□□□□□ -1.9
HOXD13P35453 AP004217.1-201ENST00000480579 346 ntBASIC3.2□□□□□ -1.9
HOXD13P35453 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.2□□□□□ -1.9
HOXD13P35453 SUMO2P6-201ENST00000505273 288 ntBASIC3.2□□□□□ -1.9
HOXD13P35453 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXD13P35453 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXD13P35453 RNU1-103P-201ENST00000516502 125 ntBASIC3.2□□□□□ -1.9
HOXD13P35453 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXD13P35453 AC012414.6-201ENST00000568241 401 ntBASIC3.2□□□□□ -1.9
HOXD13P35453 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HOXD13P35453 MIR4325-201ENST00000583049 90 ntBASIC3.2□□□□□ -1.9
HOXD13P35453 AC008739.2-201ENST00000597006 317 ntBASIC3.2□□□□□ -1.9
HOXD13P35453 UCA1.1-201ENST00000620952 75 ntBASIC3.2□□□□□ -1.9
HOXD13P35453 AC022079.1-201ENST00000621546 602 ntBASIC3.2□□□□□ -1.9
HOXD13P35453 Z69908.1-201ENST00000622603 247 ntBASIC3.2□□□□□ -1.9
HOXD13P35453 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
HOXD13P35453 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HOXD13P35453 CR848007.1-201ENST00000442354 1699 ntBASIC3.2□□□□□ -1.9
HOXD13P35453 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
HOXD13P35453 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HOXD13P35453 MTND5P19-201ENST00000424872 1794 ntBASIC3.2□□□□□ -1.9
HOXD13P35453 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HOXD13P35453 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HOXD13P35453 AC110491.1-201ENST00000562191 2010 ntBASIC3.19□□□□□ -1.9
HOXD13P35453 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HOXD13P35453 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.19□□□□□ -1.9
HOXD13P35453 RNU1-35P-201ENST00000362782 153 ntBASIC3.19□□□□□ -1.9
HOXD13P35453 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXD13P35453 SNORA44-201ENST00000384584 132 ntBASIC3.19□□□□□ -1.9
HOXD13P35453 MIR558-201ENST00000384920 94 ntBASIC3.19□□□□□ -1.9
HOXD13P35453 MIR181B1-201ENST00000385240 110 ntBASIC3.19□□□□□ -1.9
HOXD13P35453 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.19□□□□□ -1.9
HOXD13P35453 AC080125.1-201ENST00000414888 684 ntBASIC3.19□□□□□ -1.9
HOXD13P35453 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXD13P35453 ISCA1P6-201ENST00000427740 390 ntBASIC3.19□□□□□ -1.9
HOXD13P35453 AL139132.1-201ENST00000431587 344 ntBASIC3.19□□□□□ -1.9
HOXD13P35453 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXD13P35453 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXD13P35453 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.19□□□□□ -1.9
HOXD13P35453 RPL31P3-201ENST00000458430 332 ntBASIC3.19□□□□□ -1.9
HOXD13P35453 RPL27AP5-201ENST00000469428 449 ntBASIC3.19□□□□□ -1.9
HOXD13P35453 AC117522.1-201ENST00000509821 380 ntBASIC3.19□□□□□ -1.9
HOXD13P35453 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXD13P35453 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.19□□□□□ -1.9
HOXD13P35453 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXD13P35453 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXD13P35453 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.19□□□□□ -1.9
HOXD13P35453 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXD13P35453 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.19□□□□□ -1.9
HOXD13P35453 AL512643.1-201ENST00000635735 524 ntBASIC3.19□□□□□ -1.9
HOXD13P35453 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
HOXD13P35453 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXD13P35453 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HOXD13P35453 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.18□□□□□ -1.9
HOXD13P35453 AL353743.1-202ENST00000431724 1695 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms