Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.33□□□□□ -2.04
RORAP35398 TRBV12-1-201ENST00000479785 344 ntBASIC2.33□□□□□ -2.04
RORAP35398 RPS15AP36-201ENST00000492022 382 ntBASIC2.33□□□□□ -2.04
RORAP35398 RNA5SP82-201ENST00000516707 92 ntBASIC2.33□□□□□ -2.04
RORAP35398 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.33□□□□□ -2.04
RORAP35398 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
RORAP35398 MTND4P33-201ENST00000556706 766 ntBASIC2.33□□□□□ -2.04
RORAP35398 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.33□□□□□ -2.04
RORAP35398 AF038458.1-201ENST00000588406 262 ntBASIC2.33□□□□□ -2.04
RORAP35398 AC136601.2-201ENST00000604356 474 ntBASIC2.33□□□□□ -2.04
RORAP35398 AL450336.1-201ENST00000605180 586 ntBASIC2.33□□□□□ -2.04
RORAP35398 AC097468.3-201ENST00000607956 456 ntBASIC2.33□□□□□ -2.04
RORAP35398 AC005332.10-201ENST00000612725 619 ntBASIC2.33□□□□□ -2.04
RORAP35398 AC016597.2-201ENST00000613256 341 ntBASIC2.33□□□□□ -2.04
RORAP35398 AL356596.1-201ENST00000624230 379 ntBASIC2.33□□□□□ -2.04
RORAP35398 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
RORAP35398 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
RORAP35398 MIR19A-201ENST00000384878 82 ntBASIC2.32□□□□□ -2.04
RORAP35398 SNORA3.2-201ENST00000408221 125 ntBASIC2.32□□□□□ -2.04
RORAP35398 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.32□□□□□ -2.04
RORAP35398 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.32□□□□□ -2.04
RORAP35398 RPL36AP51-201ENST00000487216 318 ntBASIC2.32□□□□□ -2.04
RORAP35398 RN7SL636P-201ENST00000497504 294 ntBASIC2.32□□□□□ -2.04
RORAP35398 GTF2IP9-201ENST00000502460 301 ntBASIC2.32□□□□□ -2.04
RORAP35398 AC105252.1-201ENST00000503089 286 ntBASIC2.32□□□□□ -2.04
RORAP35398 AC234781.5-201ENST00000508429 271 ntBASIC2.32□□□□□ -2.04
RORAP35398 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.32□□□□□ -2.04
RORAP35398 OR5BN1P-201ENST00000532955 829 ntBASIC2.32□□□□□ -2.04
RORAP35398 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.32□□□□□ -2.04
RORAP35398 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.32□□□□□ -2.04
RORAP35398 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.32□□□□□ -2.04
RORAP35398 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.32□□□□□ -2.04
RORAP35398 AL133153.1-201ENST00000557756 303 ntBASIC2.32□□□□□ -2.04
RORAP35398 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.32□□□□□ -2.04
RORAP35398 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.32□□□□□ -2.04
RORAP35398 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.32□□□□□ -2.04
RORAP35398 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.32□□□□□ -2.04
RORAP35398 VN1R82P-201ENST00000601481 356 ntBASIC2.32□□□□□ -2.04
RORAP35398 AC008498.1-201ENST00000613012 531 ntBASIC2.32□□□□□ -2.04
RORAP35398 CU459211.1-201ENST00000635667 749 ntBASIC2.32□□□□□ -2.04
RORAP35398 AC006927.4-201ENST00000639187 543 ntBASIC2.32□□□□□ -2.04
RORAP35398 MTND4P35-201ENST00000604257 1375 ntBASIC2.32□□□□□ -2.04
RORAP35398 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.31□□□□□ -2.04
RORAP35398 AL139276.1-201ENST00000311910 1001 ntBASIC2.31□□□□□ -2.04
RORAP35398 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.31□□□□□ -2.04
RORAP35398 RNU6-723P-201ENST00000383973 107 ntBASIC2.31□□□□□ -2.04
RORAP35398 SNORA70B-201ENST00000384210 135 ntBASIC2.31□□□□□ -2.04
RORAP35398 RNU6-140P-201ENST00000384566 108 ntBASIC2.31□□□□□ -2.04
RORAP35398 AL139397.2-201ENST00000404529 772 ntBASIC2.31□□□□□ -2.04
RORAP35398 RNU4-53P-201ENST00000410828 140 ntBASIC2.31□□□□□ -2.04
RORAP35398 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.31□□□□□ -2.04
RORAP35398 HMGB1P49-201ENST00000418882 569 ntBASIC2.31□□□□□ -2.04
RORAP35398 MTCO3P45-201ENST00000443036 613 ntBASIC2.31□□□□□ -2.04
RORAP35398 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.31□□□□□ -2.04
RORAP35398 FAM103A2P-201ENST00000444122 354 ntBASIC2.31□□□□□ -2.04
RORAP35398 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.31□□□□□ -2.04
RORAP35398 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.31□□□□□ -2.04
RORAP35398 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.31□□□□□ -2.04
RORAP35398 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.31□□□□□ -2.04
RORAP35398 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.31□□□□□ -2.04
RORAP35398 SCARNA11.3-201ENST00000517276 130 ntBASIC2.31□□□□□ -2.04
RORAP35398 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.31□□□□□ -2.04
RORAP35398 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
RORAP35398 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RORAP35398 MIR544B-201ENST00000582372 78 ntBASIC2.31□□□□□ -2.04
RORAP35398 HMGN2P15-201ENST00000585707 270 ntBASIC2.31□□□□□ -2.04
RORAP35398 AL391001.1-201ENST00000602747 715 ntBASIC2.31□□□□□ -2.04
RORAP35398 AC007938.3-201ENST00000604965 623 ntBASIC2.31□□□□□ -2.04
RORAP35398 AC103810.6-201ENST00000606708 136 ntBASIC2.31□□□□□ -2.04
RORAP35398 RNU6-88P-201ENST00000606801 100 ntBASIC2.31□□□□□ -2.04
RORAP35398 MIR6895-201ENST00000613497 78 ntBASIC2.31□□□□□ -2.04
RORAP35398 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.31□□□□□ -2.04
RORAP35398 AC112204.3-201ENST00000623822 332 ntBASIC2.31□□□□□ -2.04
RORAP35398 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.31□□□□□ -2.04
RORAP35398 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RORAP35398 ZNF658B-202ENST00000615961 3375 ntBASIC2.3□□□□□ -2.04
RORAP35398 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.3□□□□□ -2.04
RORAP35398 RNU6-931P-201ENST00000363850 107 ntBASIC2.3□□□□□ -2.04
RORAP35398 RNU6-769P-201ENST00000384407 104 ntBASIC2.3□□□□□ -2.04
RORAP35398 RNU6-584P-201ENST00000410350 95 ntBASIC2.3□□□□□ -2.04
RORAP35398 AL359704.1-201ENST00000411586 781 ntBASIC2.3□□□□□ -2.04
RORAP35398 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RORAP35398 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.3□□□□□ -2.04
RORAP35398 USP9YP27-201ENST00000418455 438 ntBASIC2.3□□□□□ -2.04
RORAP35398 MTCO2P21-201ENST00000419780 677 ntBASIC2.3□□□□□ -2.04
RORAP35398 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.3□□□□□ -2.04
RORAP35398 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.3□□□□□ -2.04
RORAP35398 MTCO2P17-201ENST00000424336 677 ntBASIC2.3□□□□□ -2.04
RORAP35398 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.3□□□□□ -2.04
RORAP35398 AC007560.1-201ENST00000426912 237 ntBASIC2.3□□□□□ -2.04
RORAP35398 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.3□□□□□ -2.04
RORAP35398 AC010153.1-201ENST00000432862 727 ntBASIC2.3□□□□□ -2.04
RORAP35398 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.3□□□□□ -2.04
RORAP35398 RPS12P2-201ENST00000439728 269 ntBASIC2.3□□□□□ -2.04
RORAP35398 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.3□□□□□ -2.04
RORAP35398 CR769776.1-201ENST00000441254 787 ntBASIC2.3□□□□□ -2.04
RORAP35398 RPL12P25-201ENST00000455592 494 ntBASIC2.3□□□□□ -2.04
RORAP35398 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.3□□□□□ -2.04
RORAP35398 AC008481.1-201ENST00000463278 396 ntBASIC2.3□□□□□ -2.04
RORAP35398 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms