Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 RNU5A-8P-201ENST00000364102 114 ntBASIC2.36□□□□□ -2.03
SHMT2P34897 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.36□□□□□ -2.03
SHMT2P34897 SNORA41-201ENST00000384675 132 ntBASIC2.36□□□□□ -2.03
SHMT2P34897 AC078974.1-201ENST00000411597 223 ntBASIC2.36□□□□□ -2.03
SHMT2P34897 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.36□□□□□ -2.03
SHMT2P34897 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.36□□□□□ -2.03
SHMT2P34897 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.36□□□□□ -2.03
SHMT2P34897 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.36□□□□□ -2.03
SHMT2P34897 USP12PX-201ENST00000432383 1057 ntBASIC2.36□□□□□ -2.03
SHMT2P34897 AC010153.1-201ENST00000432862 727 ntBASIC2.36□□□□□ -2.03
SHMT2P34897 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.36□□□□□ -2.03
SHMT2P34897 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.36□□□□□ -2.03
SHMT2P34897 WASF1P1-201ENST00000447560 1131 ntBASIC2.36□□□□□ -2.03
SHMT2P34897 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SHMT2P34897 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.36□□□□□ -2.03
SHMT2P34897 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.36□□□□□ -2.03
SHMT2P34897 RPS27P26-201ENST00000494583 239 ntBASIC2.36□□□□□ -2.03
SHMT2P34897 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.36□□□□□ -2.03
SHMT2P34897 OR5BM1P-201ENST00000512021 366 ntBASIC2.36□□□□□ -2.03
SHMT2P34897 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.36□□□□□ -2.03
SHMT2P34897 RNU6-64P-201ENST00000517119 105 ntBASIC2.36□□□□□ -2.03
SHMT2P34897 RNU1-104P-201ENST00000517280 175 ntBASIC2.36□□□□□ -2.03
SHMT2P34897 EEF1A1P37-201ENST00000522748 715 ntBASIC2.36□□□□□ -2.03
SHMT2P34897 AP000907.2-201ENST00000530827 353 ntBASIC2.36□□□□□ -2.03
SHMT2P34897 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SHMT2P34897 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SHMT2P34897 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SHMT2P34897 AC007115.1-201ENST00000546853 234 ntBASIC2.36□□□□□ -2.03
SHMT2P34897 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.36□□□□□ -2.03
SHMT2P34897 AC027176.1-201ENST00000560204 514 ntBASIC2.36□□□□□ -2.03
SHMT2P34897 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.36□□□□□ -2.03
SHMT2P34897 AC002400.1-201ENST00000569310 726 ntBASIC2.36□□□□□ -2.03
SHMT2P34897 AC009163.5-201ENST00000575421 637 ntBASIC2.36□□□□□ -2.03
SHMT2P34897 AC008751.2-201ENST00000597885 980 ntBASIC2.36□□□□□ -2.03
SHMT2P34897 AC068790.3-201ENST00000602988 553 ntBASIC2.36□□□□□ -2.03
SHMT2P34897 AC112187.2-201ENST00000604345 283 ntBASIC2.36□□□□□ -2.03
SHMT2P34897 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.36□□□□□ -2.03
SHMT2P34897 AC107214.2-201ENST00000608204 634 ntBASIC2.36□□□□□ -2.03
SHMT2P34897 AL161734.1-201ENST00000609720 557 ntBASIC2.36□□□□□ -2.03
SHMT2P34897 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.36□□□□□ -2.03
SHMT2P34897 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SHMT2P34897 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.36□□□□□ -2.03
SHMT2P34897 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SHMT2P34897 AC007336.1-201ENST00000576365 3828 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 RNU4-82P-201ENST00000362443 140 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 RNU6-140P-201ENST00000384566 108 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 U8.14-201ENST00000390843 143 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 RPL23AP39-201ENST00000415533 405 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 AC009414.1-201ENST00000427200 443 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.35□□□□□ -2.03
SHMT2P34897 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.35□□□□□ -2.03
SHMT2P34897 AL008629.1-201ENST00000438615 184 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.35□□□□□ -2.03
SHMT2P34897 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.35□□□□□ -2.03
SHMT2P34897 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.35□□□□□ -2.03
SHMT2P34897 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.35□□□□□ -2.03
SHMT2P34897 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.35□□□□□ -2.03
SHMT2P34897 MTND4LP3-201ENST00000468320 276 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.35□□□□□ -2.03
SHMT2P34897 RPL36AP51-201ENST00000487216 318 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 AC234781.5-201ENST00000508429 271 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.35□□□□□ -2.03
SHMT2P34897 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SHMT2P34897 MTND5P13-201ENST00000513046 1079 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 RNU6-927P-201ENST00000516199 100 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 RNU6-390P-201ENST00000516259 103 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 RNA5SP82-201ENST00000516707 92 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 AC109329.2-201ENST00000519658 482 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 ATP5F1P5-201ENST00000526403 760 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
SHMT2P34897 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.35□□□□□ -2.03
SHMT2P34897 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.35□□□□□ -2.03
SHMT2P34897 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.35□□□□□ -2.03
SHMT2P34897 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.35□□□□□ -2.03
SHMT2P34897 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.35□□□□□ -2.03
SHMT2P34897 AC008739.2-201ENST00000597006 317 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 DPPA3P3-201ENST00000603842 430 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 FTX_3.1-201ENST00000610451 147 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 AC021755.4-201ENST00000616620 456 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 AL136313.1-201ENST00000624804 202 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 MIR1291-201ENST00000627649 87 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 MIR203B-201ENST00000636080 86 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 AC007671.2-201ENST00000637344 619 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
SHMT2P34897 AC016717.2-201ENST00000609089 5141 ntBASIC2.35□□□□□ -2.03
SHMT2P34897 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.03
SHMT2P34897 AC104454.1-201ENST00000421341 1401 ntBASIC2.34□□□□□ -2.03
SHMT2P34897 AC093536.2-201ENST00000565257 1406 ntBASIC2.34□□□□□ -2.03
SHMT2P34897 Y_RNA.46-201ENST00000362695 102 ntBASIC2.34□□□□□ -2.03
SHMT2P34897 RNU1-51P-201ENST00000365345 176 ntBASIC2.34□□□□□ -2.03
SHMT2P34897 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.34□□□□□ -2.03
SHMT2P34897 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.34□□□□□ -2.03
SHMT2P34897 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.34□□□□□ -2.03
SHMT2P34897 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.34□□□□□ -2.03
SHMT2P34897 AC244035.1-201ENST00000430042 390 ntBASIC2.34□□□□□ -2.03
SHMT2P34897 AC092427.1-202ENST00000430569 476 ntBASIC2.34□□□□□ -2.03
SHMT2P34897 GTF2IP20-201ENST00000431663 360 ntBASIC2.34□□□□□ -2.03
SHMT2P34897 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.34□□□□□ -2.03
SHMT2P34897 AC098826.1-201ENST00000433943 471 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 160.9 ms