Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SLC6A4P31645 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SLC6A4P31645 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SLC6A4P31645 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
SLC6A4P31645 Y_RNA.167-201ENST00000363735 109 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SLC6A4P31645 Y_RNA.387-201ENST00000383918 102 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 RNU6-434P-201ENST00000384376 107 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 MIR1290-201ENST00000408735 78 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.87□□□□□ -1.79
SLC6A4P31645 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.87□□□□□ -1.79
SLC6A4P31645 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.87□□□□□ -1.79
SLC6A4P31645 PRDX3P3-201ENST00000447765 522 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 AC233279.1-201ENST00000455300 423 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 RNU7-66P-201ENST00000459469 62 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 RPL37P6-201ENST00000460682 294 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 AC108860.1-201ENST00000484521 383 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 AC083904.1-201ENST00000487828 231 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 HMGB1P22-201ENST00000505315 124 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 MTCO3P9-201ENST00000506989 781 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 RNU6-927P-201ENST00000516199 100 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 RNU1-95P-201ENST00000516357 160 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 RNU6-1038P-201ENST00000516516 104 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 RNU1-128P-201ENST00000516704 160 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 Y_RNA.701-201ENST00000516812 110 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.87□□□□□ -1.79
SLC6A4P31645 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.87□□□□□ -1.79
SLC6A4P31645 AP000763.2-201ENST00000540641 163 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 MIR5583-1-201ENST00000580941 59 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.87□□□□□ -1.79
SLC6A4P31645 AC010928.3-201ENST00000587712 541 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.87□□□□□ -1.79
SLC6A4P31645 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.87□□□□□ -1.79
SLC6A4P31645 AC103710.3-201ENST00000608157 948 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 AC069200.1-201ENST00000609511 323 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 AC084757.4-201ENST00000616350 526 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 AL160413.1-201ENST00000622780 310 ntBASIC3.87□□□□□ -1.79
SLC6A4P31645 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
SLC6A4P31645 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SLC6A4P31645 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SLC6A4P31645 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SLC6A4P31645 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SLC6A4P31645 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SLC6A4P31645 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
SLC6A4P31645 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SLC6A4P31645 MFSD8-236ENST00000641509 4050 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SLC6A4P31645 SNORA7.2-201ENST00000364446 145 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 RNA5SP51-201ENST00000364750 119 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 Y_RNA.301-201ENST00000364990 103 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SLC6A4P31645 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SLC6A4P31645 SNORA5A-201ENST00000384111 134 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 RNU6-393P-201ENST00000384475 107 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 RNU6-14P-201ENST00000384630 106 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 RPL21P17-201ENST00000397467 475 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 MIR1302-11-201ENST00000408051 138 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 MIR1302-9-201ENST00000408365 138 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 MIR1302-10-201ENST00000408734 138 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 SYF2P2-201ENST00000417620 583 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.86□□□□□ -1.79
SLC6A4P31645 RPS6P12-201ENST00000432491 726 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 AL591212.2-201ENST00000433923 257 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.86□□□□□ -1.79
SLC6A4P31645 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.86□□□□□ -1.79
SLC6A4P31645 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.86□□□□□ -1.79
SLC6A4P31645 AC087588.1-201ENST00000462203 316 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 AC092451.1-201ENST00000480211 153 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.86□□□□□ -1.79
SLC6A4P31645 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.86□□□□□ -1.79
SLC6A4P31645 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.86□□□□□ -1.79
SLC6A4P31645 AC104136.1-201ENST00000512969 394 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.86□□□□□ -1.79
SLC6A4P31645 AC090136.1-201ENST00000520009 240 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 AP001804.3-201ENST00000525146 880 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 AP000889.1-201ENST00000530968 660 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 AP000889.2-201ENST00000532684 490 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.86□□□□□ -1.79
SLC6A4P31645 MTCO3P23-201ENST00000561363 289 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.86□□□□□ -1.79
SLC6A4P31645 MIR1302-2-201ENST00000607096 138 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 Z82243.1-201ENST00000609432 473 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 AC064836.2-201ENST00000609491 462 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 AC135507.2-201ENST00000612443 309 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 uc_338.15-201ENST00000615470 191 ntBASIC3.86□□□□□ -1.79
SLC6A4P31645 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SLC6A4P31645 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SLC6A4P31645 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SLC6A4P31645 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SLC6A4P31645 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.85□□□□□ -1.79
SLC6A4P31645 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SLC6A4P31645 AL133412.1-201ENST00000380194 2992 ntBASIC3.85□□□□□ -1.79
SLC6A4P31645 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SLC6A4P31645 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.85□□□□□ -1.79
SLC6A4P31645 Y_RNA.212-201ENST00000364177 102 ntBASIC3.85□□□□□ -1.79
SLC6A4P31645 MIR483-201ENST00000385070 76 ntBASIC3.85□□□□□ -1.79
SLC6A4P31645 CISD1P1-201ENST00000393907 327 ntBASIC3.85□□□□□ -1.79
SLC6A4P31645 BX323014.1-201ENST00000412876 237 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms