Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.31□□□□□ -1.88
HOXA13P31271 AC027807.1-201ENST00000559921 996 ntBASIC3.31□□□□□ -1.88
HOXA13P31271 EIF1P4-201ENST00000572664 335 ntBASIC3.31□□□□□ -1.88
HOXA13P31271 AC107304.1-201ENST00000604229 296 ntBASIC3.31□□□□□ -1.88
HOXA13P31271 AC027309.3-201ENST00000623419 351 ntBASIC3.31□□□□□ -1.88
HOXA13P31271 OR5H6-203ENST00000642105 978 ntBASIC3.31□□□□□ -1.88
HOXA13P31271 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXA13P31271 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXA13P31271 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXA13P31271 U8.3-201ENST00000363321 132 ntBASIC3.3□□□□□ -1.88
HOXA13P31271 SNORA5B-201ENST00000363786 132 ntBASIC3.3□□□□□ -1.88
HOXA13P31271 SNORA9.2-201ENST00000365361 133 ntBASIC3.3□□□□□ -1.88
HOXA13P31271 SNORA20.2-201ENST00000383922 131 ntBASIC3.3□□□□□ -1.88
HOXA13P31271 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HOXA13P31271 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXA13P31271 BX295541.1-201ENST00000417774 250 ntBASIC3.3□□□□□ -1.88
HOXA13P31271 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXA13P31271 RAC1P6-201ENST00000423911 575 ntBASIC3.3□□□□□ -1.88
HOXA13P31271 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXA13P31271 HMGB1P27-201ENST00000431429 603 ntBASIC3.3□□□□□ -1.88
HOXA13P31271 AC104850.1-201ENST00000435940 476 ntBASIC3.3□□□□□ -1.88
HOXA13P31271 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.3□□□□□ -1.88
HOXA13P31271 AC244505.5-201ENST00000443639 207 ntBASIC3.3□□□□□ -1.88
HOXA13P31271 AL590664.1-201ENST00000448065 339 ntBASIC3.3□□□□□ -1.88
HOXA13P31271 SNRPGP6-201ENST00000451124 220 ntBASIC3.3□□□□□ -1.88
HOXA13P31271 MTCYBP1-201ENST00000454315 1119 ntBASIC3.3□□□□□ -1.88
HOXA13P31271 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXA13P31271 SNORD97-201ENST00000459187 142 ntBASIC3.3□□□□□ -1.88
HOXA13P31271 SRRM1P2-201ENST00000464531 1192 ntBASIC3.3□□□□□ -1.88
HOXA13P31271 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXA13P31271 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXA13P31271 RNA5SP367-201ENST00000516557 118 ntBASIC3.3□□□□□ -1.88
HOXA13P31271 AC090136.1-201ENST00000520009 240 ntBASIC3.3□□□□□ -1.88
HOXA13P31271 AP003392.2-201ENST00000527269 208 ntBASIC3.3□□□□□ -1.88
HOXA13P31271 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXA13P31271 GTF3AP2-201ENST00000557014 266 ntBASIC3.3□□□□□ -1.88
HOXA13P31271 NDUFA8P1-201ENST00000605525 367 ntBASIC3.3□□□□□ -1.88
HOXA13P31271 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HOXA13P31271 AC087241.4-201ENST00000612441 480 ntBASIC3.3□□□□□ -1.88
HOXA13P31271 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HOXA13P31271 AL359740.1-201ENST00000624340 592 ntBASIC3.3□□□□□ -1.88
HOXA13P31271 PISRT1-201ENST00000626175 531 ntBASIC3.3□□□□□ -1.88
HOXA13P31271 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXA13P31271 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXA13P31271 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXA13P31271 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXA13P31271 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HOXA13P31271 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXA13P31271 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HOXA13P31271 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HOXA13P31271 AC007785.2-201ENST00000598627 1916 ntBASIC3.29□□□□□ -1.88
HOXA13P31271 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HOXA13P31271 SNORD56.2-201ENST00000363242 71 ntBASIC3.29□□□□□ -1.88
HOXA13P31271 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HOXA13P31271 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXA13P31271 UBE2V1P10-201ENST00000414685 269 ntBASIC3.29□□□□□ -1.88
HOXA13P31271 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HOXA13P31271 C1DP2-201ENST00000418167 426 ntBASIC3.29□□□□□ -1.88
HOXA13P31271 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXA13P31271 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXA13P31271 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXA13P31271 RPS20P5-201ENST00000434808 360 ntBASIC3.29□□□□□ -1.88
HOXA13P31271 RPL23AP22-201ENST00000437556 453 ntBASIC3.29□□□□□ -1.88
HOXA13P31271 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXA13P31271 AC020550.1-201ENST00000447385 163 ntBASIC3.29□□□□□ -1.88
HOXA13P31271 AC125238.1-201ENST00000448842 249 ntBASIC3.29□□□□□ -1.88
HOXA13P31271 GAPDHP17-201ENST00000449858 1001 ntBASIC3.29□□□□□ -1.88
HOXA13P31271 UQCRHP3-201ENST00000451503 251 ntBASIC3.29□□□□□ -1.88
HOXA13P31271 NIPA2P5-201ENST00000452282 464 ntBASIC3.29□□□□□ -1.88
HOXA13P31271 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXA13P31271 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXA13P31271 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXA13P31271 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXA13P31271 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXA13P31271 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXA13P31271 KC877373.1-201ENST00000479066 408 ntBASIC3.29□□□□□ -1.88
HOXA13P31271 AC138853.1-201ENST00000503549 823 ntBASIC3.29□□□□□ -1.88
HOXA13P31271 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXA13P31271 RNU7-51P-201ENST00000516560 62 ntBASIC3.29□□□□□ -1.88
HOXA13P31271 Vault.3-201ENST00000516676 95 ntBASIC3.29□□□□□ -1.88
HOXA13P31271 RNU6-711P-201ENST00000517255 106 ntBASIC3.29□□□□□ -1.88
HOXA13P31271 MTND1P5-201ENST00000517906 940 ntBASIC3.29□□□□□ -1.88
HOXA13P31271 AC245505.1-201ENST00000556398 224 ntBASIC3.29□□□□□ -1.88
HOXA13P31271 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXA13P31271 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXA13P31271 AC090578.1-201ENST00000604955 591 ntBASIC3.29□□□□□ -1.88
HOXA13P31271 AC091304.9-201ENST00000612091 226 ntBASIC3.29□□□□□ -1.88
HOXA13P31271 MIR6852-201ENST00000621699 66 ntBASIC3.29□□□□□ -1.88
HOXA13P31271 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HOXA13P31271 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXA13P31271 FARSBP1-201ENST00000435808 1778 ntBASIC3.29□□□□□ -1.88
HOXA13P31271 AC027514.1-201ENST00000588561 1603 ntBASIC3.29□□□□□ -1.88
HOXA13P31271 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HOXA13P31271 AC009487.2-201ENST00000420969 6821 ntBASIC3.28□□□□□ -1.88
HOXA13P31271 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.28□□□□□ -1.88
HOXA13P31271 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HOXA13P31271 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HOXA13P31271 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
HOXA13P31271 RNU6-741P-201ENST00000383889 107 ntBASIC3.28□□□□□ -1.88
HOXA13P31271 Y_RNA.510-201ENST00000384511 114 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms