Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AL353778.1-201ENST00000603149 408 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 AC018714.1-201ENST00000605028 208 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 AC011890.2-201ENST00000613393 294 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
HOXA9P31269 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.38□□□□□ -2.03
HOXA9P31269 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.38□□□□□ -2.03
HOXA9P31269 AC079597.1-201ENST00000624306 508 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.38□□□□□ -2.03
HOXA9P31269 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.38□□□□□ -2.03
HOXA9P31269 CR848007.1-201ENST00000442354 1699 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HOXA9P31269 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
HOXA9P31269 AL161781.1-201ENST00000354277 403 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 RNU6-359P-201ENST00000365466 108 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 AC119751.3-201ENST00000399720 670 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 MIR1289-2-201ENST00000408360 111 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXA9P31269 AC083875.1-201ENST00000419509 405 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 AC011233.1-201ENST00000422812 283 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 AL593851.1-201ENST00000426171 157 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 AL365496.1-201ENST00000426885 215 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.37□□□□□ -2.03
HOXA9P31269 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.37□□□□□ -2.03
HOXA9P31269 RPS15AP28-201ENST00000435088 386 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.37□□□□□ -2.03
HOXA9P31269 AL008629.1-201ENST00000438615 184 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.37□□□□□ -2.03
HOXA9P31269 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXA9P31269 RPS15AP27-201ENST00000449183 343 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 RPL23AP35-201ENST00000451906 501 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 snoU13.8-201ENST00000458890 104 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 AL135752.1-201ENST00000479477 471 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 RPL21P99-201ENST00000480369 423 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 MRPL42P6-201ENST00000486397 371 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXA9P31269 AC104685.1-201ENST00000502445 371 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 HMGB3P3-201ENST00000510526 400 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.37□□□□□ -2.03
HOXA9P31269 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXA9P31269 TRAV28-201ENST00000557548 323 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.37□□□□□ -2.03
HOXA9P31269 AC090888.1-201ENST00000561335 1141 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.37□□□□□ -2.03
HOXA9P31269 MYL12BP1-201ENST00000569826 507 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXA9P31269 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXA9P31269 AC008751.2-201ENST00000597885 980 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 RNU6-88P-201ENST00000606801 100 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 AC097468.3-201ENST00000607956 456 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 AL450472.3-201ENST00000615578 367 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 MIR6766-201ENST00000622641 72 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 AC110994.2-201ENST00000635481 492 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 MIR219B-201ENST00000637023 88 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 AC241585.2-209ENST00000638217 143 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 ZNF271P-202ENST00000465539 1970 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.37□□□□□ -2.03
HOXA9P31269 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
HOXA9P31269 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HOXA9P31269 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
HOXA9P31269 RNA5SP88-201ENST00000365560 109 ntBASIC2.36□□□□□ -2.03
HOXA9P31269 AL356421.1-201ENST00000403255 413 ntBASIC2.36□□□□□ -2.03
HOXA9P31269 MIR320C1-201ENST00000408566 88 ntBASIC2.36□□□□□ -2.03
HOXA9P31269 RNU2-43P-201ENST00000410306 190 ntBASIC2.36□□□□□ -2.03
HOXA9P31269 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXA9P31269 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXA9P31269 AC098592.1-201ENST00000419352 333 ntBASIC2.36□□□□□ -2.03
HOXA9P31269 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXA9P31269 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXA9P31269 AC024082.2-201ENST00000434771 238 ntBASIC2.36□□□□□ -2.03
HOXA9P31269 RSU1P2-202ENST00000437884 485 ntBASIC2.36□□□□□ -2.03
HOXA9P31269 AL354941.1-201ENST00000438600 464 ntBASIC2.36□□□□□ -2.03
HOXA9P31269 THAP5P1-201ENST00000439089 262 ntBASIC2.36□□□□□ -2.03
HOXA9P31269 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.36□□□□□ -2.03
HOXA9P31269 AP000542.1-201ENST00000448473 371 ntBASIC2.36□□□□□ -2.03
HOXA9P31269 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.36□□□□□ -2.03
HOXA9P31269 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.36□□□□□ -2.03
HOXA9P31269 AC104563.1-201ENST00000476147 376 ntBASIC2.36□□□□□ -2.03
HOXA9P31269 AC093809.1-201ENST00000509155 340 ntBASIC2.36□□□□□ -2.03
HOXA9P31269 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXA9P31269 RNA5SP200-201ENST00000516360 103 ntBASIC2.36□□□□□ -2.03
HOXA9P31269 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.36□□□□□ -2.03
HOXA9P31269 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXA9P31269 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.36□□□□□ -2.03
HOXA9P31269 ELOCP32-201ENST00000548625 324 ntBASIC2.36□□□□□ -2.03
HOXA9P31269 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXA9P31269 AC090888.2-201ENST00000559765 1144 ntBASIC2.36□□□□□ -2.03
HOXA9P31269 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXA9P31269 AC005498.1-201ENST00000592125 465 ntBASIC2.36□□□□□ -2.03
HOXA9P31269 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.36□□□□□ -2.03
HOXA9P31269 AP001429.1-201ENST00000602568 530 ntBASIC2.36□□□□□ -2.03
HOXA9P31269 AC013444.2-201ENST00000603317 787 ntBASIC2.36□□□□□ -2.03
HOXA9P31269 AL356280.1-201ENST00000603614 379 ntBASIC2.36□□□□□ -2.03
HOXA9P31269 AL139344.1-201ENST00000605228 195 ntBASIC2.36□□□□□ -2.03
HOXA9P31269 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.36□□□□□ -2.03
HOXA9P31269 MIR203B-201ENST00000636080 86 ntBASIC2.36□□□□□ -2.03
HOXA9P31269 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.36□□□□□ -2.03
HOXA9P31269 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.36□□□□□ -2.03
HOXA9P31269 SDAD1P2-201ENST00000441308 2028 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms