Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CLIP1P30622 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.23□□□□□ -2.21
CLIP1P30622 AC092474.3-201ENST00000603022 568 ntBASIC1.23□□□□□ -2.21
CLIP1P30622 AC025588.4-201ENST00000615802 908 ntBASIC1.23□□□□□ -2.21
CLIP1P30622 AL138955.1-201ENST00000622881 1040 ntBASIC1.23□□□□□ -2.21
CLIP1P30622 AC095031.1-201ENST00000623685 672 ntBASIC1.23□□□□□ -2.21
CLIP1P30622 MTND4P11-201ENST00000417020 1058 ntBASIC1.23□□□□□ -2.21
CLIP1P30622 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.23□□□□□ -2.21
CLIP1P30622 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CLIP1P30622 AC027575.1-201ENST00000481064 460 ntBASIC1.23□□□□□ -2.21
CLIP1P30622 RPS27P26-201ENST00000494583 239 ntBASIC1.23□□□□□ -2.21
CLIP1P30622 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.23□□□□□ -2.21
CLIP1P30622 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CLIP1P30622 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.23□□□□□ -2.21
CLIP1P30622 AP005137.2-201ENST00000609238 400 ntBASIC1.23□□□□□ -2.21
CLIP1P30622 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CLIP1P30622 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CLIP1P30622 RNU6-1331P-201ENST00000363658 106 ntBASIC1.22□□□□□ -2.21
CLIP1P30622 MTCYBP24-201ENST00000420387 1106 ntBASIC1.22□□□□□ -2.21
CLIP1P30622 OR51AB1P-201ENST00000429046 620 ntBASIC1.22□□□□□ -2.21
CLIP1P30622 EZH2P1-201ENST00000431167 291 ntBASIC1.22□□□□□ -2.21
CLIP1P30622 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC1.22□□□□□ -2.21
CLIP1P30622 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.22□□□□□ -2.21
CLIP1P30622 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.22□□□□□ -2.21
CLIP1P30622 snoU109.1-201ENST00000459339 135 ntBASIC1.22□□□□□ -2.21
CLIP1P30622 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.22□□□□□ -2.21
CLIP1P30622 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.22□□□□□ -2.21
CLIP1P30622 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.22□□□□□ -2.21
CLIP1P30622 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.22□□□□□ -2.21
CLIP1P30622 MIR26B-201ENST00000362251 77 ntBASIC1.21□□□□□ -2.22
CLIP1P30622 RNA5SP276-201ENST00000362580 94 ntBASIC1.21□□□□□ -2.22
CLIP1P30622 RNA5SP457-201ENST00000363657 124 ntBASIC1.21□□□□□ -2.22
CLIP1P30622 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.21□□□□□ -2.22
CLIP1P30622 AC234064.1-201ENST00000436312 247 ntBASIC1.21□□□□□ -2.22
CLIP1P30622 NEFMP1-201ENST00000443423 1006 ntBASIC1.21□□□□□ -2.22
CLIP1P30622 TPMTP4-201ENST00000450749 678 ntBASIC1.21□□□□□ -2.22
CLIP1P30622 AC023141.11-201ENST00000508864 202 ntBASIC1.21□□□□□ -2.22
CLIP1P30622 AC105245.1-201ENST00000581934 244 ntBASIC1.21□□□□□ -2.22
CLIP1P30622 AL031274.2-201ENST00000599419 203 ntBASIC1.21□□□□□ -2.22
CLIP1P30622 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
CLIP1P30622 U3.20-201ENST00000390909 217 ntBASIC1.2□□□□□ -2.22
CLIP1P30622 MIR934-201ENST00000401241 83 ntBASIC1.2□□□□□ -2.22
CLIP1P30622 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.2□□□□□ -2.22
CLIP1P30622 AC133485.1-201ENST00000567176 124 ntBASIC1.2□□□□□ -2.22
CLIP1P30622 AC138907.6-201ENST00000568401 126 ntBASIC1.2□□□□□ -2.22
CLIP1P30622 HSPE1P7-201ENST00000604681 321 ntBASIC1.2□□□□□ -2.22
CLIP1P30622 AC090525.3-201ENST00000605601 189 ntBASIC1.2□□□□□ -2.22
CLIP1P30622 AC009541.1-201ENST00000438279 2662 ntBASIC1.2□□□□□ -2.22
CLIP1P30622 RNU1-105P-201ENST00000363470 161 ntBASIC1.19□□□□□ -2.22
CLIP1P30622 RNU6ATAC31P-201ENST00000408513 126 ntBASIC1.19□□□□□ -2.22
CLIP1P30622 RN7SKP61-201ENST00000410642 295 ntBASIC1.19□□□□□ -2.22
CLIP1P30622 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.19□□□□□ -2.22
CLIP1P30622 AC093716.1-201ENST00000435923 377 ntBASIC1.19□□□□□ -2.22
CLIP1P30622 OR6C72P-201ENST00000451403 892 ntBASIC1.19□□□□□ -2.22
CLIP1P30622 SUMO2P2-201ENST00000456482 255 ntBASIC1.19□□□□□ -2.22
CLIP1P30622 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.19□□□□□ -2.22
CLIP1P30622 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.19□□□□□ -2.22
CLIP1P30622 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC1.19□□□□□ -2.22
CLIP1P30622 MIR1273G-201ENST00000577677 100 ntBASIC1.19□□□□□ -2.22
CLIP1P30622 AC007038.2-201ENST00000608095 740 ntBASIC1.19□□□□□ -2.22
CLIP1P30622 AC079395.3-201ENST00000615161 484 ntBASIC1.19□□□□□ -2.22
CLIP1P30622 MIR6513-201ENST00000621188 64 ntBASIC1.19□□□□□ -2.22
CLIP1P30622 Y_RNA.251-201ENST00000364551 99 ntBASIC1.18□□□□□ -2.22
CLIP1P30622 RNU6-516P-201ENST00000411381 104 ntBASIC1.18□□□□□ -2.22
CLIP1P30622 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.18□□□□□ -2.22
CLIP1P30622 RPL30P13-201ENST00000418873 348 ntBASIC1.18□□□□□ -2.22
CLIP1P30622 USP12PX-201ENST00000432383 1057 ntBASIC1.18□□□□□ -2.22
CLIP1P30622 PRELID3BP4-201ENST00000515476 571 ntBASIC1.18□□□□□ -2.22
CLIP1P30622 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.18□□□□□ -2.22
CLIP1P30622 LINC00933-203ENST00000559812 219 ntBASIC1.18□□□□□ -2.22
CLIP1P30622 MIR4529-201ENST00000578110 78 ntBASIC1.18□□□□□ -2.22
CLIP1P30622 AL590095.2-201ENST00000604136 117 ntBASIC1.18□□□□□ -2.22
CLIP1P30622 AC096772.1-201ENST00000609146 564 ntBASIC1.18□□□□□ -2.22
CLIP1P30622 AC007742.2-201ENST00000618226 398 ntBASIC1.18□□□□□ -2.22
CLIP1P30622 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.18□□□□□ -2.22
CLIP1P30622 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.18□□□□□ -2.22
CLIP1P30622 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.17□□□□□ -2.22
CLIP1P30622 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.17□□□□□ -2.22
CLIP1P30622 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.17□□□□□ -2.22
CLIP1P30622 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.17□□□□□ -2.22
CLIP1P30622 SNORA31.13-201ENST00000516624 135 ntBASIC1.17□□□□□ -2.22
CLIP1P30622 AL773524.1-201ENST00000614065 229 ntBASIC1.17□□□□□ -2.22
CLIP1P30622 MIR6864-201ENST00000617935 70 ntBASIC1.17□□□□□ -2.22
CLIP1P30622 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CLIP1P30622 Y_RNA.115-201ENST00000363272 98 ntBASIC1.16□□□□□ -2.22
CLIP1P30622 SNORA22-201ENST00000383907 134 ntBASIC1.16□□□□□ -2.22
CLIP1P30622 SNORA22C-201ENST00000384614 134 ntBASIC1.16□□□□□ -2.22
CLIP1P30622 HNRNPDP2-201ENST00000406475 478 ntBASIC1.16□□□□□ -2.22
CLIP1P30622 RPS15AP40-201ENST00000419621 391 ntBASIC1.16□□□□□ -2.22
CLIP1P30622 AC103851.1-201ENST00000506833 274 ntBASIC1.16□□□□□ -2.22
CLIP1P30622 RNA5SP330-201ENST00000517096 96 ntBASIC1.16□□□□□ -2.22
CLIP1P30622 AC008127.2-201ENST00000549925 1075 ntBASIC1.16□□□□□ -2.22
CLIP1P30622 AL512605.2-201ENST00000592972 256 ntBASIC1.16□□□□□ -2.22
CLIP1P30622 AC243960.4-201ENST00000600532 288 ntBASIC1.16□□□□□ -2.22
CLIP1P30622 AP003476.1-201ENST00000623984 516 ntBASIC1.16□□□□□ -2.22
CLIP1P30622 HAUS6P2-201ENST00000433254 2404 ntBASIC1.16□□□□□ -2.22
CLIP1P30622 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CLIP1P30622 AC008163.1-202ENST00000636004 2889 ntBASIC1.15□□□□□ -2.22
CLIP1P30622 MIR508-201ENST00000384857 115 ntBASIC1.15□□□□□ -2.22
CLIP1P30622 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.15□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms