Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC103810.6-201ENST00000606708 136 ntBASIC1.89□□□□□ -2.11
HLA-DMAP28067 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.89□□□□□ -2.11
HLA-DMAP28067 AC009974.1-201ENST00000608881 455 ntBASIC1.89□□□□□ -2.11
HLA-DMAP28067 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.89□□□□□ -2.11
HLA-DMAP28067 AC046143.2-201ENST00000609789 160 ntBASIC1.89□□□□□ -2.11
HLA-DMAP28067 AL391834.2-201ENST00000609982 546 ntBASIC1.89□□□□□ -2.11
HLA-DMAP28067 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.89□□□□□ -2.11
HLA-DMAP28067 AC099654.9-201ENST00000637055 678 ntBASIC1.89□□□□□ -2.11
HLA-DMAP28067 AP000776.1-201ENST00000530032 1663 ntBASIC1.89□□□□□ -2.11
HLA-DMAP28067 HSPA8P4-201ENST00000511877 1920 ntBASIC1.89□□□□□ -2.11
HLA-DMAP28067 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.89□□□□□ -2.11
HLA-DMAP28067 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
HLA-DMAP28067 AL138713.1-201ENST00000624026 2130 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 MIR208A-201ENST00000362287 71 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 RNU1-148P-201ENST00000384472 162 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 AL030996.1-201ENST00000411430 235 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 PIGPP2-201ENST00000411569 458 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 VN1R51P-201ENST00000411675 945 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DMAP28067 NANOGP5-201ENST00000424456 877 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DMAP28067 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DMAP28067 AC093106.2-201ENST00000428212 385 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.88□□□□□ -2.11
HLA-DMAP28067 AC007919.1-201ENST00000429380 217 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.88□□□□□ -2.11
HLA-DMAP28067 PTENP1-201ENST00000447117 1215 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 AL031313.1-201ENST00000448435 256 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DMAP28067 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.88□□□□□ -2.11
HLA-DMAP28067 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DMAP28067 AC068781.1-201ENST00000488231 618 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.88□□□□□ -2.11
HLA-DMAP28067 UBE2V1P12-201ENST00000503954 474 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DMAP28067 HSPE1P23-201ENST00000509838 286 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 AC109445.1-201ENST00000512356 383 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.88□□□□□ -2.11
HLA-DMAP28067 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.88□□□□□ -2.11
HLA-DMAP28067 UBTFL10-201ENST00000528532 562 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 AC023538.1-201ENST00000534576 736 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DMAP28067 LRRC37A5P-203ENST00000580181 585 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 AL451007.1-201ENST00000595491 289 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 AC008749.1-201ENST00000597650 306 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 AL391813.1-201ENST00000603098 260 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.88□□□□□ -2.11
HLA-DMAP28067 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.88□□□□□ -2.11
HLA-DMAP28067 AC106052.1-201ENST00000608029 497 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 AL133445.2-201ENST00000611191 527 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 AC022306.3-201ENST00000619930 550 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 AC091932.3-201ENST00000624223 323 ntBASIC1.88□□□□□ -2.11
HLA-DMAP28067 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HLA-DMAP28067 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.88□□□□□ -2.11
HLA-DMAP28067 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HLA-DMAP28067 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HLA-DMAP28067 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HLA-DMAP28067 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HLA-DMAP28067 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HLA-DMAP28067 RNA5SP387-201ENST00000364226 106 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 Y_RNA.333-201ENST00000365274 102 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 MIR196B-201ENST00000384852 84 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 MIR491-201ENST00000384877 84 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 MIR128-1-201ENST00000384921 82 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 RNU6-754P-201ENST00000391166 107 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 U6atac.2-201ENST00000408644 118 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.87□□□□□ -2.11
HLA-DMAP28067 RNU6-516P-201ENST00000411381 104 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.87□□□□□ -2.11
HLA-DMAP28067 AC005005.2-201ENST00000420779 380 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 BPY2DP-201ENST00000422208 265 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 RPS3AP44-201ENST00000425466 790 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.87□□□□□ -2.11
HLA-DMAP28067 AC018634.1-201ENST00000437554 401 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DMAP28067 RPL12P25-201ENST00000455592 494 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 AL121769.1-201ENST00000469473 401 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.87□□□□□ -2.11
HLA-DMAP28067 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.87□□□□□ -2.11
HLA-DMAP28067 RPS15AP36-201ENST00000492022 382 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 AC234781.5-201ENST00000508429 271 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 AC010587.2-201ENST00000511727 448 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 AC024589.1-201ENST00000512207 263 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HLA-DMAP28067 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DMAP28067 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DMAP28067 RNA5SP24-201ENST00000516478 95 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DMAP28067 MTCYBP20-201ENST00000524239 1129 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.87□□□□□ -2.11
HLA-DMAP28067 GTF3AP2-201ENST00000557014 266 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DMAP28067 MIR5007-201ENST00000583098 95 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.87□□□□□ -2.11
HLA-DMAP28067 AC021171.1-201ENST00000603137 706 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 AL096840.1-201ENST00000603287 93 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 AC090186.1-201ENST00000605991 572 ntBASIC1.87□□□□□ -2.11
HLA-DMAP28067 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.87□□□□□ -2.11
HLA-DMAP28067 TUG1_2.1-201ENST00000614234 87 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms