Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CD40P25942 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.83□□□□□ -1.8
CD40P25942 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
CD40P25942 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.83□□□□□ -1.8
CD40P25942 AL133412.1-201ENST00000380194 2992 ntBASIC3.83□□□□□ -1.8
CD40P25942 Y_RNA.2-201ENST00000362330 96 ntBASIC3.83□□□□□ -1.8
CD40P25942 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.83□□□□□ -1.8
CD40P25942 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
CD40P25942 RNU6-790P-201ENST00000384479 105 ntBASIC3.83□□□□□ -1.8
CD40P25942 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CD40P25942 RNU6-325P-201ENST00000411132 105 ntBASIC3.83□□□□□ -1.8
CD40P25942 SNORD56-201ENST00000413522 71 ntBASIC3.83□□□□□ -1.8
CD40P25942 SYF2P2-201ENST00000417620 583 ntBASIC3.83□□□□□ -1.8
CD40P25942 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.83□□□□□ -1.8
CD40P25942 TMEM167AP1-201ENST00000423409 219 ntBASIC3.83□□□□□ -1.8
CD40P25942 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.83□□□□□ -1.8
CD40P25942 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.83□□□□□ -1.8
CD40P25942 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.83□□□□□ -1.8
CD40P25942 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.83□□□□□ -1.8
CD40P25942 NIPA2P5-201ENST00000452282 464 ntBASIC3.83□□□□□ -1.8
CD40P25942 FGF7P3-201ENST00000454645 303 ntBASIC3.83□□□□□ -1.8
CD40P25942 AC010618.1-201ENST00000469924 477 ntBASIC3.83□□□□□ -1.8
CD40P25942 AC103987.1-201ENST00000473394 348 ntBASIC3.83□□□□□ -1.8
CD40P25942 RNA5SP464-201ENST00000516251 108 ntBASIC3.83□□□□□ -1.8
CD40P25942 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CD40P25942 TRAV32-201ENST00000553993 340 ntBASIC3.83□□□□□ -1.8
CD40P25942 MIR3939-201ENST00000582614 106 ntBASIC3.83□□□□□ -1.8
CD40P25942 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.83□□□□□ -1.8
CD40P25942 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.83□□□□□ -1.8
CD40P25942 AC008121.1-201ENST00000603244 268 ntBASIC3.83□□□□□ -1.8
CD40P25942 AC079587.1-201ENST00000603846 277 ntBASIC3.83□□□□□ -1.8
CD40P25942 AC113403.1-201ENST00000604910 193 ntBASIC3.83□□□□□ -1.8
CD40P25942 AL590392.1-201ENST00000604960 446 ntBASIC3.83□□□□□ -1.8
CD40P25942 AC011890.2-201ENST00000613393 294 ntBASIC3.83□□□□□ -1.8
CD40P25942 AC114781.5-201ENST00000615297 108 ntBASIC3.83□□□□□ -1.8
CD40P25942 MIR6891-201ENST00000618788 93 ntBASIC3.83□□□□□ -1.8
CD40P25942 AC091905.2-201ENST00000623143 306 ntBASIC3.83□□□□□ -1.8
CD40P25942 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CD40P25942 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CD40P25942 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.83□□□□□ -1.8
CD40P25942 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
CD40P25942 AC118273.1-201ENST00000525324 3006 ntBASIC3.83□□□□□ -1.8
CD40P25942 AL592182.3-201ENST00000642132 3304 ntBASIC3.83□□□□□ -1.8
CD40P25942 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.82□□□□□ -1.8
CD40P25942 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CD40P25942 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CD40P25942 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CD40P25942 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CD40P25942 MIR331-201ENST00000362302 94 ntBASIC3.82□□□□□ -1.8
CD40P25942 SNORA22B-201ENST00000383876 138 ntBASIC3.82□□□□□ -1.8
CD40P25942 RNU1-63P-201ENST00000383902 164 ntBASIC3.82□□□□□ -1.8
CD40P25942 RNU6-658P-201ENST00000384606 106 ntBASIC3.82□□□□□ -1.8
CD40P25942 RNU6-331P-201ENST00000384724 107 ntBASIC3.82□□□□□ -1.8
CD40P25942 MIR606-201ENST00000384851 96 ntBASIC3.82□□□□□ -1.8
CD40P25942 SNORA75.6-201ENST00000391318 127 ntBASIC3.82□□□□□ -1.8
CD40P25942 SNORA11F-201ENST00000408237 128 ntBASIC3.82□□□□□ -1.8
CD40P25942 RNU2-37P-201ENST00000410695 177 ntBASIC3.82□□□□□ -1.8
CD40P25942 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.82□□□□□ -1.8
CD40P25942 PMCHL1-202ENST00000423102 261 ntBASIC3.82□□□□□ -1.8
CD40P25942 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.82□□□□□ -1.8
CD40P25942 USMG5P1-201ENST00000425964 177 ntBASIC3.82□□□□□ -1.8
CD40P25942 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.82□□□□□ -1.8
CD40P25942 RSL24D1P6-201ENST00000426934 401 ntBASIC3.82□□□□□ -1.8
CD40P25942 AL158071.1-201ENST00000430315 461 ntBASIC3.82□□□□□ -1.8
CD40P25942 AL137792.2-201ENST00000443484 235 ntBASIC3.82□□□□□ -1.8
CD40P25942 FTH1P25-201ENST00000447665 469 ntBASIC3.82□□□□□ -1.8
CD40P25942 AL451050.1-201ENST00000450126 415 ntBASIC3.82□□□□□ -1.8
CD40P25942 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.82□□□□□ -1.8
CD40P25942 snoU109.2-201ENST00000459316 135 ntBASIC3.82□□□□□ -1.8
CD40P25942 RPL23AP45-201ENST00000476406 468 ntBASIC3.82□□□□□ -1.8
CD40P25942 RN7SL812P-201ENST00000493791 279 ntBASIC3.82□□□□□ -1.8
CD40P25942 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.82□□□□□ -1.8
CD40P25942 FTH1P9-201ENST00000513251 355 ntBASIC3.82□□□□□ -1.8
CD40P25942 RNU6-327P-201ENST00000516270 127 ntBASIC3.82□□□□□ -1.8
CD40P25942 RNA5SP384-201ENST00000516615 116 ntBASIC3.82□□□□□ -1.8
CD40P25942 RNA5SP309-201ENST00000516670 106 ntBASIC3.82□□□□□ -1.8
CD40P25942 AC022634.1-201ENST00000520765 532 ntBASIC3.82□□□□□ -1.8
CD40P25942 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CD40P25942 H3F3AP1-201ENST00000559984 334 ntBASIC3.82□□□□□ -1.8
CD40P25942 AC109446.1-201ENST00000566172 220 ntBASIC3.82□□□□□ -1.8
CD40P25942 MIR4782-201ENST00000577987 79 ntBASIC3.82□□□□□ -1.8
CD40P25942 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.82□□□□□ -1.8
CD40P25942 MIR3138-201ENST00000585238 82 ntBASIC3.82□□□□□ -1.8
CD40P25942 AC006504.6-201ENST00000590142 199 ntBASIC3.82□□□□□ -1.8
CD40P25942 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.82□□□□□ -1.8
CD40P25942 IPO5P1-202ENST00000600039 287 ntBASIC3.82□□□□□ -1.8
CD40P25942 AC016925.2-201ENST00000605108 242 ntBASIC3.82□□□□□ -1.8
CD40P25942 AC138627.2-201ENST00000624202 601 ntBASIC3.82□□□□□ -1.8
CD40P25942 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.82□□□□□ -1.8
CD40P25942 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CD40P25942 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CD40P25942 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CD40P25942 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.82□□□□□ -1.8
CD40P25942 AC090740.1-201ENST00000623193 2262 ntBASIC3.82□□□□□ -1.8
CD40P25942 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CD40P25942 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CD40P25942 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CD40P25942 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.81□□□□□ -1.8
CD40P25942 FAM35BP-202ENST00000497389 3337 ntBASIC3.81□□□□□ -1.8
CD40P25942 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms