| PTPN2 | P17706 | CACNB4-222 | ENST00000636350 | 7654 nt | TSL 5 BASIC | 3.44 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | EVI5-201 | ENST00000370331 | 7403 nt | APPRIS P3 TSL 1 (best) BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | TAS2R14-202 | ENST00000537503 | 1858 nt | APPRIS P1 BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | TEX30-201 | ENST00000376019 | 1689 nt | TSL 2 BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | GSTA3-201 | ENST00000211122 | 902 nt | APPRIS P1 TSL 1 (best) BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | RNA5-8SP4-201 | ENST00000365096 | 150 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | RNU6-641P-201 | ENST00000384006 | 107 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | RNU6-1103P-201 | ENST00000384150 | 107 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | MIR514A1-201 | ENST00000385133 | 98 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | TRAV34-201 | ENST00000390461 | 349 nt | APPRIS P1 BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | MTCO3P40-201 | ENST00000392516 | 676 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | NDUFS5P1-201 | ENST00000405668 | 289 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | RN7SKP140-201 | ENST00000411196 | 284 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AC126124.2-201 | ENST00000413542 | 321 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AL590705.3-201 | ENST00000416066 | 474 nt | TSL 1 (best) BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AL445123.1-201 | ENST00000422023 | 446 nt | TSL 2 BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | RAC1P6-201 | ENST00000423911 | 575 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AC005062.1-206 | ENST00000424516 | 710 nt | TSL 3 BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | BX679664.1-201 | ENST00000434429 | 253 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AC020594.1-201 | ENST00000437680 | 338 nt | TSL 3 BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AL590664.1-201 | ENST00000448065 | 339 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | PSPHP1-201 | ENST00000450062 | 261 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AC093392.2-201 | ENST00000450682 | 337 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | RPL31P60-201 | ENST00000478450 | 367 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AC079382.1-201 | ENST00000493346 | 557 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AC131956.2-201 | ENST00000510922 | 512 nt | TSL 3 BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | CSN1S2AP-204 | ENST00000512167 | 671 nt | TSL 3 BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AC022360.2-202 | ENST00000517308 | 407 nt | TSL 3 BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AC068657.1-201 | ENST00000520807 | 306 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AC060765.1-201 | ENST00000522776 | 544 nt | TSL 4 BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AC010185.1-201 | ENST00000542489 | 456 nt | TSL 3 BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AC133480.1-201 | ENST00000547563 | 381 nt | TSL 3 BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AL445074.1-201 | ENST00000555362 | 318 nt | TSL 2 BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | MIR3921-201 | ENST00000577308 | 85 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | LARP7P3-201 | ENST00000579888 | 337 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AL121992.2-201 | ENST00000606262 | 256 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | HOTAIRM1_2.1-201 | ENST00000616712 | 215 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | FRG1KP-201 | ENST00000623592 | 341 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AC018692.3-201 | ENST00000623929 | 123 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | CR381653.2-201 | ENST00000624041 | 768 nt | BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | CCSER2-201 | ENST00000224756 | 7664 nt | APPRIS P1 TSL 5 BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | ATP2C1-202 | ENST00000359644 | 3401 nt | APPRIS P3 TSL 1 (best) BASIC | 3.43 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | SYTL2-203 | ENST00000359152 | 4123 nt | APPRIS ALT1 TSL 1 (best) BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | NDST3-201 | ENST00000296499 | 5961 nt | APPRIS P1 TSL 1 (best) BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | ZBTB8OS-201 | ENST00000341885 | 312 nt | TSL 1 (best) BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | Y_RNA.22-201 | ENST00000362492 | 102 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | Y_RNA.159-201 | ENST00000363674 | 87 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | RNU6-108P-201 | ENST00000365558 | 107 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | Y_RNA.372-201 | ENST00000365599 | 102 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | TSHB-202 | ENST00000369517 | 474 nt | APPRIS P1 TSL 1 (best) BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | MIR558-201 | ENST00000384920 | 94 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | CALM2P3-201 | ENST00000400429 | 449 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AL122016.1-201 | ENST00000403365 | 367 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | TANK-204 | ENST00000403609 | 555 nt | TSL 1 (best) BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | MIR548F1-201 | ENST00000408667 | 84 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | U3.42-201 | ENST00000408746 | 214 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | RNU2-9P-201 | ENST00000410194 | 145 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | UBE2V1P10-201 | ENST00000414685 | 269 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AC106873.1-201 | ENST00000420664 | 459 nt | TSL 3 BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AL109947.1-201 | ENST00000423747 | 382 nt | TSL 2 BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AL590783.1-201 | ENST00000424138 | 456 nt | TSL 2 BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | MTCO2P19-201 | ENST00000427513 | 598 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | DPPA2P1-201 | ENST00000428060 | 556 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | RPL21P40-201 | ENST00000428586 | 483 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | MACC1-AS1-201 | ENST00000439285 | 639 nt | TSL 3 BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | RPS15AP9-201 | ENST00000439856 | 381 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | IGKV1OR-3-201 | ENST00000446944 | 348 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | RN7SL863P-201 | ENST00000462370 | 296 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | PPP2R2B-IT1-201 | ENST00000505921 | 447 nt | TSL 3 BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | RNU6-1092P-201 | ENST00000516955 | 87 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | TAS2R43-201 | ENST00000531678 | 1027 nt | APPRIS P1 BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | PCED1B-AS1-208 | ENST00000551898 | 359 nt | TSL 3 BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | TGIF1P1-201 | ENST00000558095 | 802 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AC087463.4-202 | ENST00000566676 | 579 nt | TSL 3 BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AC099793.1-201 | ENST00000567538 | 285 nt | TSL 3 BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AL133383.1-201 | ENST00000569292 | 901 nt | TSL 1 (best) BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AC007598.2-201 | ENST00000569490 | 539 nt | TSL 3 BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AC005858.4-201 | ENST00000623191 | 700 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AC009161.2-201 | ENST00000624626 | 138 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | ADGRG2-206 | ENST00000360279 | 4702 nt | TSL 1 (best) BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | NR3C1-212 | ENST00000504572 | 3389 nt | APPRIS ALT1 TSL 1 (best) BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | PWAR6-201 | ENST00000552334 | 4618 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | ATF2-204 | ENST00000409437 | 3697 nt | TSL 5 BASIC | 3.41 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | GEN1-201 | ENST00000317402 | 9854 nt | APPRIS P1 TSL 2 BASIC | 3.41 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | MS4A5-201 | ENST00000300190 | 722 nt | APPRIS P1 TSL 1 (best) BASIC | 3.41 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | DYNLT3P1-201 | ENST00000378574 | 347 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | RFPL3S-202 | ENST00000382086 | 455 nt | APPRIS ALT2 TSL 2 BASIC | 3.41 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | Y_RNA.554-201 | ENST00000384672 | 102 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AL138885.1-201 | ENST00000405921 | 675 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | RNU2-39P-201 | ENST00000410604 | 198 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | RNA5SP31-201 | ENST00000411144 | 127 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | MTATP6P18-201 | ENST00000417994 | 673 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | SDCBPP3-201 | ENST00000419629 | 891 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | COTL1P1-201 | ENST00000422309 | 375 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | LINC01351-201 | ENST00000424735 | 526 nt | TSL 2 BASIC | 3.41 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | RPL23AP69-201 | ENST00000431134 | 458 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | RPS20P5-201 | ENST00000434808 | 360 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | AC079781.2-201 | ENST00000446424 | 169 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | RPS20P20-201 | ENST00000460498 | 340 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| PTPN2 | P17706 | CFAP44-AS1-201 | ENST00000473329 | 396 nt | TSL 2 BASIC | 3.41 | □□□□□ -1.86 | | |