Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NCK1P16333 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.29□□□□□ -2.04
NCK1P16333 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.29□□□□□ -2.04
NCK1P16333 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NCK1P16333 MIR9-1-201ENST00000385198 89 ntBASIC2.29□□□□□ -2.04
NCK1P16333 RNU6-817P-201ENST00000391083 104 ntBASIC2.29□□□□□ -2.04
NCK1P16333 AL360182.1-201ENST00000397433 468 ntBASIC2.29□□□□□ -2.04
NCK1P16333 U3.37-201ENST00000408528 213 ntBASIC2.29□□□□□ -2.04
NCK1P16333 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.29□□□□□ -2.04
NCK1P16333 AC007064.1-201ENST00000412238 351 ntBASIC2.29□□□□□ -2.04
NCK1P16333 BTF3L4P3-201ENST00000418879 476 ntBASIC2.29□□□□□ -2.04
NCK1P16333 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.29□□□□□ -2.04
NCK1P16333 AC104651.1-201ENST00000427559 735 ntBASIC2.29□□□□□ -2.04
NCK1P16333 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.29□□□□□ -2.04
NCK1P16333 CR769776.1-201ENST00000441254 787 ntBASIC2.29□□□□□ -2.04
NCK1P16333 AL513328.1-201ENST00000446460 224 ntBASIC2.29□□□□□ -2.04
NCK1P16333 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.29□□□□□ -2.04
NCK1P16333 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.29□□□□□ -2.04
NCK1P16333 ANKRD26P4-201ENST00000455755 950 ntBASIC2.29□□□□□ -2.04
NCK1P16333 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.29□□□□□ -2.04
NCK1P16333 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NCK1P16333 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.29□□□□□ -2.04
NCK1P16333 RPL37P25-201ENST00000507308 276 ntBASIC2.29□□□□□ -2.04
NCK1P16333 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.29□□□□□ -2.04
NCK1P16333 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.29□□□□□ -2.04
NCK1P16333 SNORA31.11-201ENST00000516528 139 ntBASIC2.29□□□□□ -2.04
NCK1P16333 RNU1-104P-201ENST00000517280 175 ntBASIC2.29□□□□□ -2.04
NCK1P16333 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.29□□□□□ -2.04
NCK1P16333 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.29□□□□□ -2.04
NCK1P16333 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.29□□□□□ -2.04
NCK1P16333 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.29□□□□□ -2.04
NCK1P16333 AC135628.1-201ENST00000568867 534 ntBASIC2.29□□□□□ -2.04
NCK1P16333 BNIP3P23-201ENST00000599655 511 ntBASIC2.29□□□□□ -2.04
NCK1P16333 AF131215.7-201ENST00000602443 707 ntBASIC2.29□□□□□ -2.04
NCK1P16333 AL049779.4-201ENST00000604500 156 ntBASIC2.29□□□□□ -2.04
NCK1P16333 ATP1B3P1-201ENST00000605365 821 ntBASIC2.29□□□□□ -2.04
NCK1P16333 AL355472.4-201ENST00000610233 626 ntBASIC2.29□□□□□ -2.04
NCK1P16333 AC013470.4-201ENST00000619978 986 ntBASIC2.29□□□□□ -2.04
NCK1P16333 AP002782.1-201ENST00000623107 614 ntBASIC2.29□□□□□ -2.04
NCK1P16333 OR4G3P-201ENST00000633500 913 ntBASIC2.29□□□□□ -2.04
NCK1P16333 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.29□□□□□ -2.04
NCK1P16333 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NCK1P16333 AC093536.2-201ENST00000565257 1406 ntBASIC2.28□□□□□ -2.04
NCK1P16333 UBE2L2-201ENST00000254302 429 ntBASIC2.28□□□□□ -2.04
NCK1P16333 NACAP2-201ENST00000318548 624 ntBASIC2.28□□□□□ -2.04
NCK1P16333 RNU6-7-201ENST00000364784 107 ntBASIC2.28□□□□□ -2.04
NCK1P16333 RNU6-8-201ENST00000365467 107 ntBASIC2.28□□□□□ -2.04
NCK1P16333 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.28□□□□□ -2.04
NCK1P16333 SNORA41-201ENST00000384675 132 ntBASIC2.28□□□□□ -2.04
NCK1P16333 ANAPC10P1-201ENST00000395991 556 ntBASIC2.28□□□□□ -2.04
NCK1P16333 SNORA11.2-201ENST00000408318 127 ntBASIC2.28□□□□□ -2.04
NCK1P16333 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.28□□□□□ -2.04
NCK1P16333 RNU6-584P-201ENST00000410350 95 ntBASIC2.28□□□□□ -2.04
NCK1P16333 USP9YP6-201ENST00000413550 854 ntBASIC2.28□□□□□ -2.04
NCK1P16333 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.28□□□□□ -2.04
NCK1P16333 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.28□□□□□ -2.04
NCK1P16333 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.28□□□□□ -2.04
NCK1P16333 FCF1P1-201ENST00000432690 571 ntBASIC2.28□□□□□ -2.04
NCK1P16333 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.28□□□□□ -2.04
NCK1P16333 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
NCK1P16333 AC096725.1-201ENST00000514266 313 ntBASIC2.28□□□□□ -2.04
NCK1P16333 RNU6-311P-201ENST00000516224 102 ntBASIC2.28□□□□□ -2.04
NCK1P16333 RNA5SP367-201ENST00000516557 118 ntBASIC2.28□□□□□ -2.04
NCK1P16333 RNA5SP471-201ENST00000516971 106 ntBASIC2.28□□□□□ -2.04
NCK1P16333 SCARNA3-201ENST00000517097 143 ntBASIC2.28□□□□□ -2.04
NCK1P16333 RNU6-1003P-201ENST00000517099 105 ntBASIC2.28□□□□□ -2.04
NCK1P16333 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.28□□□□□ -2.04
NCK1P16333 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.28□□□□□ -2.04
NCK1P16333 PRELID2P1-201ENST00000552837 301 ntBASIC2.28□□□□□ -2.04
NCK1P16333 AC024619.4-201ENST00000580924 316 ntBASIC2.28□□□□□ -2.04
NCK1P16333 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.28□□□□□ -2.04
NCK1P16333 KC877982.1-201ENST00000602313 470 ntBASIC2.28□□□□□ -2.04
NCK1P16333 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.28□□□□□ -2.04
NCK1P16333 AC091965.4-201ENST00000607691 587 ntBASIC2.28□□□□□ -2.04
NCK1P16333 AC009974.1-201ENST00000608881 455 ntBASIC2.28□□□□□ -2.04
NCK1P16333 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.28□□□□□ -2.04
NCK1P16333 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.28□□□□□ -2.04
NCK1P16333 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.28□□□□□ -2.04
NCK1P16333 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.28□□□□□ -2.04
NCK1P16333 AC005336.3-201ENST00000623833 2679 ntBASIC2.28□□□□□ -2.04
NCK1P16333 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NCK1P16333 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
NCK1P16333 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
NCK1P16333 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
NCK1P16333 MIR128-1-201ENST00000384921 82 ntBASIC2.27□□□□□ -2.05
NCK1P16333 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.27□□□□□ -2.05
NCK1P16333 RNU2-62P-201ENST00000410868 191 ntBASIC2.27□□□□□ -2.05
NCK1P16333 AF274854.1-201ENST00000413236 615 ntBASIC2.27□□□□□ -2.05
NCK1P16333 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.27□□□□□ -2.05
NCK1P16333 AL353729.1-201ENST00000425044 720 ntBASIC2.27□□□□□ -2.05
NCK1P16333 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.27□□□□□ -2.05
NCK1P16333 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.27□□□□□ -2.05
NCK1P16333 TIMM9P1-201ENST00000436122 256 ntBASIC2.27□□□□□ -2.05
NCK1P16333 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.27□□□□□ -2.05
NCK1P16333 BRK1P2-201ENST00000442875 223 ntBASIC2.27□□□□□ -2.05
NCK1P16333 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.27□□□□□ -2.05
NCK1P16333 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.27□□□□□ -2.05
NCK1P16333 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.27□□□□□ -2.05
NCK1P16333 RPL23AP45-201ENST00000476406 468 ntBASIC2.27□□□□□ -2.05
NCK1P16333 RPS3AP14-201ENST00000483907 780 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms