Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC018710.1-201ENST00000506509 158 ntBASIC3.04□□□□□ -1.92
HLA-DOBP13765 AC104806.1-201ENST00000508720 308 ntBASIC3.04□□□□□ -1.92
HLA-DOBP13765 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DOBP13765 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DOBP13765 AC025465.4-201ENST00000513422 638 ntBASIC3.04□□□□□ -1.92
HLA-DOBP13765 RNU4-29P-201ENST00000515943 174 ntBASIC3.04□□□□□ -1.92
HLA-DOBP13765 RNU6-927P-201ENST00000516199 100 ntBASIC3.04□□□□□ -1.92
HLA-DOBP13765 SCARNA15.2-201ENST00000516409 127 ntBASIC3.04□□□□□ -1.92
HLA-DOBP13765 RNU6-685P-201ENST00000517088 95 ntBASIC3.04□□□□□ -1.92
HLA-DOBP13765 IGKV2-26-201ENST00000518305 343 ntBASIC3.04□□□□□ -1.92
HLA-DOBP13765 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.04□□□□□ -1.92
HLA-DOBP13765 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DOBP13765 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DOBP13765 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DOBP13765 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DOBP13765 DPPA3P3-201ENST00000603842 430 ntBASIC3.04□□□□□ -1.92
HLA-DOBP13765 BNIP3P10-201ENST00000605360 577 ntBASIC3.04□□□□□ -1.92
HLA-DOBP13765 AC006023.2-201ENST00000609916 167 ntBASIC3.04□□□□□ -1.92
HLA-DOBP13765 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DOBP13765 AC012409.4-201ENST00000612923 249 ntBASIC3.04□□□□□ -1.92
HLA-DOBP13765 AC010338.1-201ENST00000621823 717 ntBASIC3.04□□□□□ -1.92
HLA-DOBP13765 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DOBP13765 MIR7153-201ENST00000637758 57 ntBASIC3.04□□□□□ -1.92
HLA-DOBP13765 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-DOBP13765 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DOBP13765 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DOBP13765 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
HLA-DOBP13765 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
HLA-DOBP13765 OR4G1P-203ENST00000641984 1631 ntBASIC3.04□□□□□ -1.92
HLA-DOBP13765 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.03□□□□□ -1.92
HLA-DOBP13765 MTND4P14-201ENST00000435799 1354 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.03□□□□□ -1.92
HLA-DOBP13765 AC106871.1-201ENST00000568324 3102 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 OR4G2P-202ENST00000641004 1759 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 ASNSP3-201ENST00000451989 1306 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DOBP13765 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HLA-DOBP13765 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DOBP13765 Y_RNA.160-201ENST00000363677 92 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 SNORA62.3-201ENST00000365110 153 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
HLA-DOBP13765 RNU6-14P-201ENST00000384630 106 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 AL606923.1-201ENST00000406616 190 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 RNU2-71P-201ENST00000411395 189 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 AC126124.2-201ENST00000413542 321 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DOBP13765 AL356968.1-201ENST00000416622 474 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 RPL21P111-201ENST00000418453 477 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 BX842559.1-201ENST00000419615 532 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.03□□□□□ -1.92
HLA-DOBP13765 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DOBP13765 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.03□□□□□ -1.92
HLA-DOBP13765 AL118520.1-201ENST00000450770 291 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 FABP5P13-201ENST00000452144 328 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DOBP13765 SNRPFP3-201ENST00000457792 225 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 RPL23AP14-201ENST00000468281 468 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 AC091885.1-201ENST00000506658 268 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 AC117522.3-201ENST00000507974 584 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 Y_RNA.702-201ENST00000516843 96 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 RNU6-1231P-201ENST00000517185 103 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 AC107934.2-201ENST00000518653 310 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 CENPUP1-201ENST00000526649 1202 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 OR5D17P-201ENST00000531492 978 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.03□□□□□ -1.92
HLA-DOBP13765 AC007458.1-201ENST00000542812 373 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.03□□□□□ -1.92
HLA-DOBP13765 AC011602.1-201ENST00000546484 331 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.03□□□□□ -1.92
HLA-DOBP13765 ADI1P3-201ENST00000549509 470 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.03□□□□□ -1.92
HLA-DOBP13765 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.03□□□□□ -1.92
HLA-DOBP13765 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DOBP13765 MIR3158-1-201ENST00000583596 81 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 AC008521.1-201ENST00000587471 187 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 AC010525.2-201ENST00000590920 195 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 AC025253.1-201ENST00000613623 543 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 AL359547.2-201ENST00000615810 418 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 MTND5P42-201ENST00000637720 498 ntBASIC3.03□□□□□ -1.92
HLA-DOBP13765 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
HLA-DOBP13765 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.03□□□□□ -1.92
HLA-DOBP13765 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.03□□□□□ -1.93
HLA-DOBP13765 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DOBP13765 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
HLA-DOBP13765 TPTE2P4-201ENST00000258589 1605 ntBASIC3.02□□□□□ -1.93
HLA-DOBP13765 Y_RNA.72-201ENST00000362894 103 ntBASIC3.02□□□□□ -1.93
HLA-DOBP13765 MIR490-201ENST00000384865 128 ntBASIC3.02□□□□□ -1.93
HLA-DOBP13765 RNU6-55P-201ENST00000411092 107 ntBASIC3.02□□□□□ -1.93
HLA-DOBP13765 RNU6-954P-201ENST00000411355 107 ntBASIC3.02□□□□□ -1.93
HLA-DOBP13765 BX323014.1-201ENST00000412876 237 ntBASIC3.02□□□□□ -1.93
HLA-DOBP13765 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DOBP13765 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DOBP13765 NDUFB4P7-201ENST00000423198 363 ntBASIC3.02□□□□□ -1.93
HLA-DOBP13765 AC012498.1-201ENST00000424037 437 ntBASIC3.02□□□□□ -1.93
HLA-DOBP13765 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DOBP13765 RPL7P46-201ENST00000425129 740 ntBASIC3.02□□□□□ -1.93
HLA-DOBP13765 RPL23AP82-202ENST00000427528 469 ntBASIC3.02□□□□□ -1.93
HLA-DOBP13765 SRIP2-201ENST00000428470 166 ntBASIC3.02□□□□□ -1.93
HLA-DOBP13765 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DOBP13765 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms