Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC078899.2-201ENST00000595282 212 ntBASIC0.42□□□□□ -2.34
APOBP04114 AC087588.2-201ENST00000617667 426 ntBASIC0.42□□□□□ -2.34
APOBP04114 AP003485.1-201ENST00000625093 753 ntBASIC0.42□□□□□ -2.34
APOBP04114 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.42□□□□□ -2.34
APOBP04114 RPL31P60-201ENST00000478450 367 ntBASIC0.42□□□□□ -2.34
APOBP04114 MTCO3P35-201ENST00000485582 781 ntBASIC0.42□□□□□ -2.34
APOBP04114 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC0.42□□□□□ -2.34
APOBP04114 MTND4P12-201ENST00000498999 1377 ntBASIC0.42□□□□□ -2.34
APOBP04114 AC233728.2-201ENST00000425348 757 ntBASIC0.42□□□□□ -2.34
APOBP04114 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.42□□□□□ -2.34
APOBP04114 AC005786.1-201ENST00000588553 154 ntBASIC0.42□□□□□ -2.34
APOBP04114 OR4G3P-201ENST00000633500 913 ntBASIC0.42□□□□□ -2.34
APOBP04114 AC009902.3-201ENST00000606235 2172 ntBASIC0.41□□□□□ -2.34
APOBP04114 CISD1P1-201ENST00000393907 327 ntBASIC0.41□□□□□ -2.34
APOBP04114 AC004022.2-201ENST00000413824 193 ntBASIC0.41□□□□□ -2.34
APOBP04114 AL161449.1-201ENST00000414531 1199 ntBASIC0.41□□□□□ -2.34
APOBP04114 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
APOBP04114 AL109918.3-201ENST00000603072 338 ntBASIC0.41□□□□□ -2.34
APOBP04114 AL355297.2-201ENST00000604792 129 ntBASIC0.41□□□□□ -2.34
APOBP04114 AL356432.1-201ENST00000405809 419 ntBASIC0.41□□□□□ -2.34
APOBP04114 ARL2BPP3-201ENST00000421226 480 ntBASIC0.41□□□□□ -2.34
APOBP04114 AC241520.1-201ENST00000422654 1099 ntBASIC0.41□□□□□ -2.34
APOBP04114 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.41□□□□□ -2.34
APOBP04114 SNORD95.1-201ENST00000364099 68 ntBASIC0.41□□□□□ -2.34
APOBP04114 AC096533.1-201ENST00000411645 353 ntBASIC0.41□□□□□ -2.34
APOBP04114 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.41□□□□□ -2.34
APOBP04114 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
APOBP04114 RNU6-496P-201ENST00000516145 99 ntBASIC0.41□□□□□ -2.34
APOBP04114 EIF4EP5-201ENST00000528228 640 ntBASIC0.41□□□□□ -2.34
APOBP04114 MIR4802-201ENST00000581881 80 ntBASIC0.41□□□□□ -2.34
APOBP04114 MIR4653-201ENST00000585107 83 ntBASIC0.41□□□□□ -2.34
APOBP04114 VN1R84P-201ENST00000593697 235 ntBASIC0.41□□□□□ -2.34
APOBP04114 RNU1-72P-201ENST00000362976 153 ntBASIC0.4□□□□□ -2.34
APOBP04114 RNU6-115P-201ENST00000364310 107 ntBASIC0.4□□□□□ -2.34
APOBP04114 CCNB2P1-201ENST00000399411 1150 ntBASIC0.4□□□□□ -2.34
APOBP04114 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC0.4□□□□□ -2.34
APOBP04114 AC121161.1-201ENST00000510606 652 ntBASIC0.4□□□□□ -2.34
APOBP04114 AC245128.3-201ENST00000594721 748 ntBASIC0.4□□□□□ -2.34
APOBP04114 RNU6-288P-201ENST00000363690 104 ntBASIC0.4□□□□□ -2.35
APOBP04114 AP002784.2-201ENST00000397300 549 ntBASIC0.4□□□□□ -2.35
APOBP04114 AL353898.1-201ENST00000444055 238 ntBASIC0.4□□□□□ -2.35
APOBP04114 AC074029.2-201ENST00000551045 634 ntBASIC0.4□□□□□ -2.35
APOBP04114 AC023824.2-201ENST00000566185 400 ntBASIC0.4□□□□□ -2.35
APOBP04114 MIR4514-201ENST00000581410 57 ntBASIC0.4□□□□□ -2.35
APOBP04114 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC0.4□□□□□ -2.35
APOBP04114 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.4□□□□□ -2.35
APOBP04114 RPS6P14-201ENST00000425165 719 ntBASIC0.4□□□□□ -2.35
APOBP04114 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.4□□□□□ -2.35
APOBP04114 AC117454.1-201ENST00000491120 168 ntBASIC0.4□□□□□ -2.35
APOBP04114 OR10V3P-201ENST00000525712 725 ntBASIC0.4□□□□□ -2.35
APOBP04114 AL161912.3-201ENST00000605404 628 ntBASIC0.4□□□□□ -2.35
APOBP04114 AL118508.4-201ENST00000624142 1176 ntBASIC0.4□□□□□ -2.35
APOBP04114 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.4□□□□□ -2.35
APOBP04114 AL031577.2-201ENST00000404133 280 ntBASIC0.4□□□□□ -2.35
APOBP04114 AL512604.1-201ENST00000404812 257 ntBASIC0.4□□□□□ -2.35
APOBP04114 RNU6-920P-201ENST00000410926 92 ntBASIC0.4□□□□□ -2.35
APOBP04114 RNU6-229P-201ENST00000516614 102 ntBASIC0.4□□□□□ -2.35
APOBP04114 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.4□□□□□ -2.35
APOBP04114 MIR4636-201ENST00000582271 80 ntBASIC0.4□□□□□ -2.35
APOBP04114 uc_338.22-201ENST00000622722 187 ntBASIC0.4□□□□□ -2.35
APOBP04114 AC083865.1-201ENST00000636634 831 ntBASIC0.4□□□□□ -2.35
APOBP04114 CBX3P1-201ENST00000325243 554 ntBASIC0.39□□□□□ -2.35
APOBP04114 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
APOBP04114 RNU6-1263P-201ENST00000384601 106 ntBASIC0.39□□□□□ -2.35
APOBP04114 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.39□□□□□ -2.35
APOBP04114 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
APOBP04114 PRELID3BP1-201ENST00000457142 540 ntBASIC0.39□□□□□ -2.35
APOBP04114 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.39□□□□□ -2.35
APOBP04114 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.39□□□□□ -2.35
APOBP04114 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.39□□□□□ -2.35
APOBP04114 CYP4A27P-201ENST00000567218 190 ntBASIC0.39□□□□□ -2.35
APOBP04114 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.39□□□□□ -2.35
APOBP04114 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC0.39□□□□□ -2.35
APOBP04114 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.39□□□□□ -2.35
APOBP04114 AP001350.1-201ENST00000601906 1524 ntBASIC0.39□□□□□ -2.35
APOBP04114 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.39□□□□□ -2.35
APOBP04114 SNORA1.3-201ENST00000384676 136 ntBASIC0.39□□□□□ -2.35
APOBP04114 AC010099.1-201ENST00000455434 375 ntBASIC0.39□□□□□ -2.35
APOBP04114 CABYRP1-201ENST00000465493 1045 ntBASIC0.39□□□□□ -2.35
APOBP04114 AP000254.1-201ENST00000609934 520 ntBASIC0.39□□□□□ -2.35
APOBP04114 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.39□□□□□ -2.35
APOBP04114 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
APOBP04114 MIR508-201ENST00000384857 115 ntBASIC0.39□□□□□ -2.35
APOBP04114 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.39□□□□□ -2.35
APOBP04114 AL356867.1-201ENST00000429623 299 ntBASIC0.39□□□□□ -2.35
APOBP04114 KLF3P2-201ENST00000465138 268 ntBASIC0.39□□□□□ -2.35
APOBP04114 RN7SKP34-201ENST00000516142 244 ntBASIC0.39□□□□□ -2.35
APOBP04114 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.39□□□□□ -2.35
APOBP04114 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.39□□□□□ -2.35
APOBP04114 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
APOBP04114 CIR1P3-201ENST00000405137 479 ntBASIC0.38□□□□□ -2.35
APOBP04114 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.38□□□□□ -2.35
APOBP04114 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.38□□□□□ -2.35
APOBP04114 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.38□□□□□ -2.35
APOBP04114 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.38□□□□□ -2.35
APOBP04114 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
APOBP04114 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC0.38□□□□□ -2.35
APOBP04114 RNU6-335P-201ENST00000364563 113 ntBASIC0.38□□□□□ -2.35
APOBP04114 SNORA22-201ENST00000383907 134 ntBASIC0.38□□□□□ -2.35
APOBP04114 SNORA22C-201ENST00000384614 134 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms