Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.13
OPN1SWP03999 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.78□□□□□ -2.13
OPN1SWP03999 AC080128.1-201ENST00000474389 1917 ntBASIC1.78□□□□□ -2.13
OPN1SWP03999 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
OPN1SWP03999 AL079343.1-201ENST00000572358 1771 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
OPN1SWP03999 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.77□□□□□ -2.13
OPN1SWP03999 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
OPN1SWP03999 MTND4P27-201ENST00000450813 1354 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
OPN1SWP03999 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
OPN1SWP03999 RNU6-97P-201ENST00000363387 104 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 RNU4-51P-201ENST00000364206 140 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 RNU6-1078P-201ENST00000364522 103 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 RNU6-1207P-201ENST00000384343 107 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.77□□□□□ -2.13
OPN1SWP03999 AL109755.1-201ENST00000401791 649 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 RNU6-1328P-201ENST00000410938 106 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.77□□□□□ -2.13
OPN1SWP03999 TIMM9P2-201ENST00000419324 266 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.77□□□□□ -2.13
OPN1SWP03999 Z98742.2-201ENST00000431564 187 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 AL445646.1-201ENST00000431784 216 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 USP12PX-201ENST00000432383 1057 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.77□□□□□ -2.13
OPN1SWP03999 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.77□□□□□ -2.13
OPN1SWP03999 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.77□□□□□ -2.13
OPN1SWP03999 ARPC3P5-201ENST00000448802 534 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 AC104629.1-201ENST00000494226 508 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 AC022447.3-201ENST00000506865 495 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 RNU5F-8P-201ENST00000515941 111 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 RNU6-276P-201ENST00000516114 96 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 RNU6-840P-201ENST00000517275 65 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.77□□□□□ -2.13
OPN1SWP03999 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
OPN1SWP03999 AP000873.5-201ENST00000533906 236 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 CYCSP26-201ENST00000534107 320 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.77□□□□□ -2.13
OPN1SWP03999 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.77□□□□□ -2.13
OPN1SWP03999 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.77□□□□□ -2.13
OPN1SWP03999 AL512347.1-201ENST00000566420 503 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 AC135628.1-201ENST00000568867 534 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 AL606834.3-201ENST00000602615 496 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.77□□□□□ -2.13
OPN1SWP03999 AC025594.3-201ENST00000613068 790 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 uc_338.20-201ENST00000621563 178 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.77□□□□□ -2.13
OPN1SWP03999 AC068057.2-201ENST00000624047 895 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 AL159972.1-201ENST00000625150 448 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 AC131280.1-202ENST00000624067 4211 ntBASIC1.77□□□□□ -2.13
OPN1SWP03999 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 SNORA3A-201ENST00000364113 130 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 RNU6-637P-201ENST00000384050 107 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 Y_RNA.472-201ENST00000384322 102 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 RNU4-26P-201ENST00000410270 107 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 HMGB1P49-201ENST00000418882 569 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 ZNF863P-201ENST00000426746 417 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 AC007560.1-201ENST00000426912 237 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.76□□□□□ -2.13
OPN1SWP03999 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.76□□□□□ -2.13
OPN1SWP03999 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.76□□□□□ -2.13
OPN1SWP03999 MTND5P14-201ENST00000441481 1267 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 FTH1P25-201ENST00000447665 469 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 FDX1P2-201ENST00000450769 375 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 snoU13.15-201ENST00000459407 104 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 RPS20P20-201ENST00000460498 340 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 AC106872.3-201ENST00000495104 446 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.76□□□□□ -2.13
OPN1SWP03999 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.76□□□□□ -2.13
OPN1SWP03999 AC022447.1-201ENST00000515358 464 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 RNA5SP291-201ENST00000517222 105 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 OR5AQ1P-201ENST00000527596 927 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.76□□□□□ -2.13
OPN1SWP03999 ANP32BP3-201ENST00000559213 706 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.76□□□□□ -2.13
OPN1SWP03999 BNIP3P27-201ENST00000599991 412 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 SNORD14A-201ENST00000606526 91 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.76□□□□□ -2.13
OPN1SWP03999 AC104763.3-201ENST00000613765 618 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.76□□□□□ -2.13
OPN1SWP03999 AL136981.2-201ENST00000617319 734 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 OR1S1-201ENST00000624470 978 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.76□□□□□ -2.13
OPN1SWP03999 AC110994.2-201ENST00000635481 492 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 MIR219B-201ENST00000637023 88 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
OPN1SWP03999 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.76□□□□□ -2.13
OPN1SWP03999 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.76□□□□□ -2.13
OPN1SWP03999 DDX10P1-201ENST00000448545 1933 ntBASIC1.76□□□□□ -2.13
OPN1SWP03999 SNORA23-201ENST00000365128 182 ntBASIC1.75□□□□□ -2.13
OPN1SWP03999 RNU6-140P-201ENST00000384566 108 ntBASIC1.75□□□□□ -2.13
OPN1SWP03999 RNU6-1257P-201ENST00000384625 110 ntBASIC1.75□□□□□ -2.13
OPN1SWP03999 RNU6-114P-201ENST00000384704 105 ntBASIC1.75□□□□□ -2.13
OPN1SWP03999 MIR17-201ENST00000385012 84 ntBASIC1.75□□□□□ -2.13
OPN1SWP03999 RNU6-220P-201ENST00000390919 107 ntBASIC1.75□□□□□ -2.13
OPN1SWP03999 RNU6-920P-201ENST00000410926 92 ntBASIC1.75□□□□□ -2.13
OPN1SWP03999 AC023141.4-201ENST00000412031 328 ntBASIC1.75□□□□□ -2.13
OPN1SWP03999 RPS15AP5-201ENST00000436276 388 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 190.1 ms