Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AL354950.2-201ENST00000617939 290 ntBASIC3.89□□□□□ -1.79
COL3A1P02461 AC090617.10-201ENST00000624308 134 ntBASIC3.89□□□□□ -1.79
COL3A1P02461 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.89□□□□□ -1.79
COL3A1P02461 PWAR6-201ENST00000552334 4618 ntBASIC3.89□□□□□ -1.79
COL3A1P02461 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COL3A1P02461 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL3A1P02461 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
COL3A1P02461 RNU6-1097P-201ENST00000363586 107 ntBASIC3.88□□□□□ -1.79
COL3A1P02461 SNORA20.2-201ENST00000383922 131 ntBASIC3.88□□□□□ -1.79
COL3A1P02461 RNU6-730P-201ENST00000383954 104 ntBASIC3.88□□□□□ -1.79
COL3A1P02461 Y_RNA.445-201ENST00000384168 102 ntBASIC3.88□□□□□ -1.79
COL3A1P02461 RNU6-331P-201ENST00000384724 107 ntBASIC3.88□□□□□ -1.79
COL3A1P02461 HMGB1P17-201ENST00000403495 628 ntBASIC3.88□□□□□ -1.79
COL3A1P02461 RN7SKP58-201ENST00000411010 305 ntBASIC3.88□□□□□ -1.79
COL3A1P02461 AL592148.1-201ENST00000413568 445 ntBASIC3.88□□□□□ -1.79
COL3A1P02461 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.88□□□□□ -1.79
COL3A1P02461 AC233981.1-201ENST00000423224 461 ntBASIC3.88□□□□□ -1.79
COL3A1P02461 Z82205.1-201ENST00000428456 297 ntBASIC3.88□□□□□ -1.79
COL3A1P02461 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.88□□□□□ -1.79
COL3A1P02461 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.88□□□□□ -1.79
COL3A1P02461 AC125238.1-201ENST00000448842 249 ntBASIC3.88□□□□□ -1.79
COL3A1P02461 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.88□□□□□ -1.79
COL3A1P02461 PPP1R2P5-201ENST00000457256 603 ntBASIC3.88□□□□□ -1.79
COL3A1P02461 MTND5P22-201ENST00000458380 195 ntBASIC3.88□□□□□ -1.79
COL3A1P02461 RNU7-136P-201ENST00000458819 69 ntBASIC3.88□□□□□ -1.79
COL3A1P02461 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.88□□□□□ -1.79
COL3A1P02461 AC098583.1-201ENST00000480875 255 ntBASIC3.88□□□□□ -1.79
COL3A1P02461 TMEM248P1-201ENST00000510579 951 ntBASIC3.88□□□□□ -1.79
COL3A1P02461 RNU4-49P-201ENST00000516080 140 ntBASIC3.88□□□□□ -1.79
COL3A1P02461 Y_RNA.711-201ENST00000516993 102 ntBASIC3.88□□□□□ -1.79
COL3A1P02461 AC068657.1-201ENST00000520807 306 ntBASIC3.88□□□□□ -1.79
COL3A1P02461 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.88□□□□□ -1.79
COL3A1P02461 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.88□□□□□ -1.79
COL3A1P02461 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.88□□□□□ -1.79
COL3A1P02461 AC121334.2-201ENST00000605387 271 ntBASIC3.88□□□□□ -1.79
COL3A1P02461 AL627309.6-201ENST00000606857 840 ntBASIC3.88□□□□□ -1.79
COL3A1P02461 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.88□□□□□ -1.79
COL3A1P02461 AC040168.1-201ENST00000623594 991 ntBASIC3.88□□□□□ -1.79
COL3A1P02461 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL3A1P02461 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL3A1P02461 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.88□□□□□ -1.79
COL3A1P02461 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.88□□□□□ -1.79
COL3A1P02461 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL3A1P02461 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL3A1P02461 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL3A1P02461 Y_RNA.46-201ENST00000362695 102 ntBASIC3.87□□□□□ -1.79
COL3A1P02461 RNU6-108P-201ENST00000365558 107 ntBASIC3.87□□□□□ -1.79
COL3A1P02461 RNU6-317P-201ENST00000384031 107 ntBASIC3.87□□□□□ -1.79
COL3A1P02461 RNU6-729P-201ENST00000384399 107 ntBASIC3.87□□□□□ -1.79
COL3A1P02461 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
COL3A1P02461 AC234782.4-201ENST00000417646 1048 ntBASIC3.87□□□□□ -1.79
COL3A1P02461 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.87□□□□□ -1.79
COL3A1P02461 AL353777.1-201ENST00000425552 326 ntBASIC3.87□□□□□ -1.79
COL3A1P02461 SRIP2-201ENST00000428470 166 ntBASIC3.87□□□□□ -1.79
COL3A1P02461 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.87□□□□□ -1.79
COL3A1P02461 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.87□□□□□ -1.79
COL3A1P02461 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.87□□□□□ -1.79
COL3A1P02461 HMGB3P8-201ENST00000449709 577 ntBASIC3.87□□□□□ -1.79
COL3A1P02461 S100A11P1-201ENST00000477525 312 ntBASIC3.87□□□□□ -1.79
COL3A1P02461 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.87□□□□□ -1.79
COL3A1P02461 MTND4LP22-201ENST00000508209 276 ntBASIC3.87□□□□□ -1.79
COL3A1P02461 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.87□□□□□ -1.79
COL3A1P02461 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.87□□□□□ -1.79
COL3A1P02461 AC022616.6-201ENST00000520479 119 ntBASIC3.87□□□□□ -1.79
COL3A1P02461 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.87□□□□□ -1.79
COL3A1P02461 OR4R1P-201ENST00000529879 463 ntBASIC3.87□□□□□ -1.79
COL3A1P02461 AC018630.1-201ENST00000541376 925 ntBASIC3.87□□□□□ -1.79
COL3A1P02461 XIAPP1-201ENST00000603162 600 ntBASIC3.87□□□□□ -1.79
COL3A1P02461 Z84480.1-201ENST00000605131 311 ntBASIC3.87□□□□□ -1.79
COL3A1P02461 AL080274.1-201ENST00000605565 220 ntBASIC3.87□□□□□ -1.79
COL3A1P02461 AC103710.3-201ENST00000608157 948 ntBASIC3.87□□□□□ -1.79
COL3A1P02461 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.87□□□□□ -1.79
COL3A1P02461 AC009318.4-201ENST00000620496 486 ntBASIC3.87□□□□□ -1.79
COL3A1P02461 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL3A1P02461 AC000403.1-201ENST00000613696 3585 ntBASIC3.87□□□□□ -1.79
COL3A1P02461 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.87□□□□□ -1.79
COL3A1P02461 AC073343.1-201ENST00000328239 651 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 Y_RNA.184-201ENST00000363884 108 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 RNU6-1105P-201ENST00000384774 107 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.86□□□□□ -1.79
COL3A1P02461 BTBD10P2-201ENST00000404779 676 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 RN7SKP222-201ENST00000410651 315 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL3A1P02461 COTL1P1-201ENST00000422309 375 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.86□□□□□ -1.79
COL3A1P02461 AC073069.1-201ENST00000428657 441 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 RPS24P8-201ENST00000431490 402 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.86□□□□□ -1.79
COL3A1P02461 AL162389.1-201ENST00000449233 177 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.86□□□□□ -1.79
COL3A1P02461 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.86□□□□□ -1.79
COL3A1P02461 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.86□□□□□ -1.79
COL3A1P02461 AC010301.1-201ENST00000473936 355 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AC078785.3-201ENST00000476607 425 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.86□□□□□ -1.79
COL3A1P02461 RN7SL633P-201ENST00000488974 297 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AC083906.5-201ENST00000503722 328 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.86□□□□□ -1.79
COL3A1P02461 RNU6-1046P-201ENST00000516538 107 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 RNU6-1314P-201ENST00000517139 104 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms