Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC093591.3-201ENST00000634516 308 ntBASIC1.94□□□□□ -2.1
HLA-DQB1P01920 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HLA-DQB1P01920 AC092125.1-201ENST00000562568 1995 ntBASIC1.94□□□□□ -2.1
HLA-DQB1P01920 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HLA-DQB1P01920 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
HLA-DQB1P01920 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DQB1P01920 RNA5SP68-201ENST00000363885 119 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 Y_RNA.302-201ENST00000364997 102 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 AL513475.1-201ENST00000406602 315 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 AC023141.4-201ENST00000412031 328 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DQB1P01920 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DQB1P01920 AL451062.2-201ENST00000427515 271 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 USP12PX-201ENST00000432383 1057 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DQB1P01920 PGBD4P3-201ENST00000440731 581 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DQB1P01920 RPL7P36-201ENST00000444633 681 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DQB1P01920 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DQB1P01920 RPL12P25-201ENST00000455592 494 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DQB1P01920 RNU7-59P-201ENST00000459101 61 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 MRPS17P3-201ENST00000465453 385 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DQB1P01920 SUMO2P6-201ENST00000505273 288 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DQB1P01920 AC008413.1-201ENST00000511864 177 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 AC108043.1-201ENST00000512696 574 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DQB1P01920 RNU1-40P-201ENST00000516816 164 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 RNU1-97P-201ENST00000516872 164 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 SNORA70.24-201ENST00000517233 118 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DQB1P01920 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DQB1P01920 AC002545.1-201ENST00000592511 181 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 BNIP3P23-201ENST00000599655 511 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 AC239868.4-201ENST00000608318 671 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DQB1P01920 AC004852.3-201ENST00000614131 326 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DQB1P01920 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 AC091965.5-201ENST00000624785 342 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 U2.21-201ENST00000637295 81 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DQB1P01920 AL359693.1-201ENST00000614959 2407 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 MTND4P16-201ENST00000466108 1367 ntBASIC1.93□□□□□ -2.1
HLA-DQB1P01920 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DQB1P01920 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
HLA-DQB1P01920 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
HLA-DQB1P01920 Y_RNA.97-201ENST00000363094 102 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 SNORA48.2-201ENST00000390926 124 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.92□□□□□ -2.1
HLA-DQB1P01920 MIR888-201ENST00000401186 77 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AC244035.1-201ENST00000430042 390 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AC010153.1-201ENST00000432862 727 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.92□□□□□ -2.1
HLA-DQB1P01920 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AL591719.1-201ENST00000444669 744 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 ELOCP30-201ENST00000447108 299 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQB1P01920 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AC013267.1-201ENST00000458227 267 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 RPL31P41-201ENST00000477967 372 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 RPS3AP14-201ENST00000483907 780 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 RPS29P20-201ENST00000489592 171 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AL160314.1-201ENST00000490836 438 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AC113155.1-201ENST00000511141 769 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 SNORA31.3-201ENST00000516029 96 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 RNU6-64P-201ENST00000517119 105 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 RN7SKP258-201ENST00000517151 304 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 RNA5SP291-201ENST00000517222 105 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQB1P01920 ATP5F1P5-201ENST00000526403 760 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 GLYCAM1-201ENST00000546596 285 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 OR11H5P-201ENST00000554039 926 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AL359212.1-201ENST00000556608 614 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQB1P01920 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DQB1P01920 MIR4307-201ENST00000582802 84 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DQB1P01920 OR1M4P-201ENST00000589199 287 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AC091965.4-201ENST00000607691 587 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AC107294.1-201ENST00000609524 467 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AC135507.2-201ENST00000612443 309 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AL392048.1-201ENST00000613946 534 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AL031667.3-201ENST00000620124 655 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AC009831.4-201ENST00000620744 325 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 uc_338.20-201ENST00000621563 178 ntBASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.92□□□□□ -2.1
HLA-DQB1P01920 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DQB1P01920 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms