Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC060788.1-201ENST00000521318 469 ntBASIC2.84□□□□□ -1.95
PDGFBP01127 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.84□□□□□ -1.95
PDGFBP01127 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.84□□□□□ -1.95
PDGFBP01127 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.84□□□□□ -1.95
PDGFBP01127 AC078899.3-201ENST00000599065 212 ntBASIC2.84□□□□□ -1.95
PDGFBP01127 AC121247.2-201ENST00000604776 136 ntBASIC2.84□□□□□ -1.95
PDGFBP01127 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.84□□□□□ -1.95
PDGFBP01127 AC239868.4-201ENST00000608318 671 ntBASIC2.84□□□□□ -1.95
PDGFBP01127 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.84□□□□□ -1.95
PDGFBP01127 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
PDGFBP01127 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.84□□□□□ -1.95
PDGFBP01127 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.84□□□□□ -1.95
PDGFBP01127 CR848007.1-201ENST00000442354 1699 ntBASIC2.84□□□□□ -1.95
PDGFBP01127 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
PDGFBP01127 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PDGFBP01127 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PDGFBP01127 SNORD116-8-201ENST00000384365 95 ntBASIC2.83□□□□□ -1.96
PDGFBP01127 RNU6-140P-201ENST00000384566 108 ntBASIC2.83□□□□□ -1.96
PDGFBP01127 SNORA26.8-201ENST00000391306 124 ntBASIC2.83□□□□□ -1.96
PDGFBP01127 AL139039.1-201ENST00000401900 692 ntBASIC2.83□□□□□ -1.96
PDGFBP01127 RNA5SP492-201ENST00000411330 114 ntBASIC2.83□□□□□ -1.96
PDGFBP01127 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.83□□□□□ -1.96
PDGFBP01127 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.83□□□□□ -1.96
PDGFBP01127 AC107081.1-201ENST00000414975 361 ntBASIC2.83□□□□□ -1.96
PDGFBP01127 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.83□□□□□ -1.96
PDGFBP01127 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.83□□□□□ -1.96
PDGFBP01127 USP12PX-201ENST00000432383 1057 ntBASIC2.83□□□□□ -1.96
PDGFBP01127 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.83□□□□□ -1.96
PDGFBP01127 AC118469.1-201ENST00000442943 488 ntBASIC2.83□□□□□ -1.96
PDGFBP01127 RPS15AP27-201ENST00000449183 343 ntBASIC2.83□□□□□ -1.96
PDGFBP01127 AC013267.1-201ENST00000458227 267 ntBASIC2.83□□□□□ -1.96
PDGFBP01127 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.83□□□□□ -1.96
PDGFBP01127 AL160314.1-201ENST00000490836 438 ntBASIC2.83□□□□□ -1.96
PDGFBP01127 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.83□□□□□ -1.96
PDGFBP01127 SNORA64.4-201ENST00000516632 81 ntBASIC2.83□□□□□ -1.96
PDGFBP01127 RNU6-548P-201ENST00000517083 115 ntBASIC2.83□□□□□ -1.96
PDGFBP01127 AC022634.1-201ENST00000520765 532 ntBASIC2.83□□□□□ -1.96
PDGFBP01127 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.83□□□□□ -1.96
PDGFBP01127 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
PDGFBP01127 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PDGFBP01127 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PDGFBP01127 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.83□□□□□ -1.96
PDGFBP01127 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.83□□□□□ -1.96
PDGFBP01127 AL391261.3-201ENST00000557194 520 ntBASIC2.83□□□□□ -1.96
PDGFBP01127 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.83□□□□□ -1.96
PDGFBP01127 DEFB122-202ENST00000569013 197 ntBASIC2.83□□□□□ -1.96
PDGFBP01127 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.83□□□□□ -1.96
PDGFBP01127 AC008507.1-201ENST00000587506 734 ntBASIC2.83□□□□□ -1.96
PDGFBP01127 AC068790.3-201ENST00000602988 553 ntBASIC2.83□□□□□ -1.96
PDGFBP01127 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.83□□□□□ -1.96
PDGFBP01127 AL391813.2-201ENST00000609113 322 ntBASIC2.83□□□□□ -1.96
PDGFBP01127 AC012150.2-201ENST00000621300 544 ntBASIC2.83□□□□□ -1.96
PDGFBP01127 AC091965.5-201ENST00000624785 342 ntBASIC2.83□□□□□ -1.96
PDGFBP01127 AL136313.1-201ENST00000624804 202 ntBASIC2.83□□□□□ -1.96
PDGFBP01127 AC241585.2-209ENST00000638217 143 ntBASIC2.83□□□□□ -1.96
PDGFBP01127 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PDGFBP01127 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.83□□□□□ -1.96
PDGFBP01127 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PDGFBP01127 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.83□□□□□ -1.96
PDGFBP01127 MIR512-1-201ENST00000384913 84 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 MIR888-201ENST00000401186 77 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 RPS20P2-201ENST00000402520 389 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 FO393413.1-201ENST00000402892 195 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 MIR1302-8-201ENST00000408342 128 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 RNA5SP21-201ENST00000410917 96 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 RNA5SP31-201ENST00000411144 127 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 AC078974.1-201ENST00000411597 223 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.82□□□□□ -1.96
PDGFBP01127 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.82□□□□□ -1.96
PDGFBP01127 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.82□□□□□ -1.96
PDGFBP01127 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.82□□□□□ -1.96
PDGFBP01127 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.82□□□□□ -1.96
PDGFBP01127 MTND2P22-201ENST00000444325 1033 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 AL590365.1-201ENST00000450788 243 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.82□□□□□ -1.96
PDGFBP01127 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.82□□□□□ -1.96
PDGFBP01127 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.82□□□□□ -1.96
PDGFBP01127 RNA5SP385-201ENST00000515947 110 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 RPL7P20-201ENST00000520308 745 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 AC106038.2-201ENST00000520706 568 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 AC068657.1-201ENST00000520807 306 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 IGKV3-31-201ENST00000523109 329 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.82□□□□□ -1.96
PDGFBP01127 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.82□□□□□ -1.96
PDGFBP01127 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.82□□□□□ -1.96
PDGFBP01127 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.82□□□□□ -1.96
PDGFBP01127 AC123904.2-201ENST00000548059 300 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.82□□□□□ -1.96
PDGFBP01127 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.82□□□□□ -1.96
PDGFBP01127 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.82□□□□□ -1.96
PDGFBP01127 AC025281.1-201ENST00000567026 265 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 AP000403.1-201ENST00000603349 851 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 AL355877.2-201ENST00000603670 358 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 AL022161.1-201ENST00000604390 213 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 AC007038.2-201ENST00000608095 740 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 AC073114.1-201ENST00000612027 490 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 AC008498.1-201ENST00000613012 531 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.82□□□□□ -1.96
PDGFBP01127 MIR3974-201ENST00000637126 96 ntBASIC2.82□□□□□ -1.96
PDGFBP01127 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms