Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.99□□□□□ -2.09
VAPBO95292 SNRPGP19-201ENST00000603826 189 ntBASIC1.99□□□□□ -2.09
VAPBO95292 AC103710.1-201ENST00000610003 901 ntBASIC1.99□□□□□ -2.09
VAPBO95292 AC023158.2-201ENST00000614876 543 ntBASIC1.99□□□□□ -2.09
VAPBO95292 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.99□□□□□ -2.09
VAPBO95292 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.99□□□□□ -2.09
VAPBO95292 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.99□□□□□ -2.09
VAPBO95292 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.99□□□□□ -2.09
VAPBO95292 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.99□□□□□ -2.09
VAPBO95292 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.98□□□□□ -2.09
VAPBO95292 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
VAPBO95292 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
VAPBO95292 FAM133CP-201ENST00000332869 704 ntBASIC1.98□□□□□ -2.09
VAPBO95292 MIR147B-201ENST00000390185 80 ntBASIC1.98□□□□□ -2.09
VAPBO95292 AC068533.2-201ENST00000411872 306 ntBASIC1.98□□□□□ -2.09
VAPBO95292 RPL30P4-201ENST00000429309 333 ntBASIC1.98□□□□□ -2.09
VAPBO95292 Z98742.2-201ENST00000431564 187 ntBASIC1.98□□□□□ -2.09
VAPBO95292 AL445646.1-201ENST00000431784 216 ntBASIC1.98□□□□□ -2.09
VAPBO95292 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.98□□□□□ -2.09
VAPBO95292 UBE2D3P1-201ENST00000436669 444 ntBASIC1.98□□□□□ -2.09
VAPBO95292 FABP5P14-201ENST00000437273 393 ntBASIC1.98□□□□□ -2.09
VAPBO95292 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.98□□□□□ -2.09
VAPBO95292 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.98□□□□□ -2.09
VAPBO95292 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.98□□□□□ -2.09
VAPBO95292 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.98□□□□□ -2.09
VAPBO95292 AC090515.1-201ENST00000465295 476 ntBASIC1.98□□□□□ -2.09
VAPBO95292 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.98□□□□□ -2.09
VAPBO95292 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.98□□□□□ -2.09
VAPBO95292 RPS27P21-201ENST00000486977 252 ntBASIC1.98□□□□□ -2.09
VAPBO95292 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.98□□□□□ -2.09
VAPBO95292 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.98□□□□□ -2.09
VAPBO95292 MTND5P13-201ENST00000513046 1079 ntBASIC1.98□□□□□ -2.09
VAPBO95292 RNU6-1028P-201ENST00000517164 93 ntBASIC1.98□□□□□ -2.09
VAPBO95292 AC023825.1-201ENST00000566704 1030 ntBASIC1.98□□□□□ -2.09
VAPBO95292 MIR3167-201ENST00000579623 85 ntBASIC1.98□□□□□ -2.09
VAPBO95292 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.98□□□□□ -2.09
VAPBO95292 PISRT1-201ENST00000626175 531 ntBASIC1.98□□□□□ -2.09
VAPBO95292 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.98□□□□□ -2.09
VAPBO95292 AC099063.3-201ENST00000642066 185 ntBASIC1.98□□□□□ -2.09
VAPBO95292 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
VAPBO95292 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.98□□□□□ -2.09
VAPBO95292 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
VAPBO95292 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
VAPBO95292 RNU6-486P-201ENST00000363116 107 ntBASIC1.97□□□□□ -2.09
VAPBO95292 snoZ40.1-201ENST00000364540 72 ntBASIC1.97□□□□□ -2.09
VAPBO95292 Y_RNA.500-201ENST00000384466 111 ntBASIC1.97□□□□□ -2.09
VAPBO95292 U6atac.2-201ENST00000408644 118 ntBASIC1.97□□□□□ -2.09
VAPBO95292 RNU2-2P-201ENST00000410396 191 ntBASIC1.97□□□□□ -2.09
VAPBO95292 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.97□□□□□ -2.09
VAPBO95292 MTND4P3-201ENST00000417829 541 ntBASIC1.97□□□□□ -2.09
VAPBO95292 ELOCP14-201ENST00000428070 331 ntBASIC1.97□□□□□ -2.09
VAPBO95292 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.97□□□□□ -2.09
VAPBO95292 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.97□□□□□ -2.09
VAPBO95292 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.97□□□□□ -2.09
VAPBO95292 ELOCP7-201ENST00000439968 331 ntBASIC1.97□□□□□ -2.09
VAPBO95292 GPM6BP3-201ENST00000442797 145 ntBASIC1.97□□□□□ -2.09
VAPBO95292 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.97□□□□□ -2.09
VAPBO95292 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
VAPBO95292 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.97□□□□□ -2.09
VAPBO95292 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.97□□□□□ -2.09
VAPBO95292 RNA5SP112-201ENST00000515937 99 ntBASIC1.97□□□□□ -2.09
VAPBO95292 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.97□□□□□ -2.09
VAPBO95292 AC126365.2-201ENST00000580630 379 ntBASIC1.97□□□□□ -2.09
VAPBO95292 AC009237.15-201ENST00000610252 501 ntBASIC1.97□□□□□ -2.09
VAPBO95292 U2.15-201ENST00000611544 191 ntBASIC1.97□□□□□ -2.09
VAPBO95292 U2.16-201ENST00000613119 191 ntBASIC1.97□□□□□ -2.09
VAPBO95292 U2.12-201ENST00000613778 191 ntBASIC1.97□□□□□ -2.09
VAPBO95292 U2.20-201ENST00000613956 192 ntBASIC1.97□□□□□ -2.09
VAPBO95292 U2.9-201ENST00000615427 191 ntBASIC1.97□□□□□ -2.09
VAPBO95292 U2.11-201ENST00000616345 191 ntBASIC1.97□□□□□ -2.09
VAPBO95292 U2.2-201ENST00000616535 191 ntBASIC1.97□□□□□ -2.09
VAPBO95292 U2.3-201ENST00000617785 191 ntBASIC1.97□□□□□ -2.09
VAPBO95292 U2.19-201ENST00000618602 191 ntBASIC1.97□□□□□ -2.09
VAPBO95292 RNU2-1-201ENST00000618664 191 ntBASIC1.97□□□□□ -2.09
VAPBO95292 U2.6-201ENST00000619225 191 ntBASIC1.97□□□□□ -2.09
VAPBO95292 U2.5-201ENST00000619465 191 ntBASIC1.97□□□□□ -2.09
VAPBO95292 U2.10-201ENST00000620268 191 ntBASIC1.97□□□□□ -2.09
VAPBO95292 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.97□□□□□ -2.09
VAPBO95292 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
VAPBO95292 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.97□□□□□ -2.09
VAPBO95292 AL359854.1-201ENST00000614203 1594 ntBASIC1.97□□□□□ -2.09
VAPBO95292 AL359851.1-201ENST00000569460 4997 ntBASIC1.97□□□□□ -2.09
VAPBO95292 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
VAPBO95292 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
VAPBO95292 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
VAPBO95292 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
VAPBO95292 RNU6-224P-201ENST00000384055 107 ntBASIC1.96□□□□□ -2.1
VAPBO95292 AL445529.1-201ENST00000398713 389 ntBASIC1.96□□□□□ -2.1
VAPBO95292 RNU2-68P-201ENST00000410878 191 ntBASIC1.96□□□□□ -2.1
VAPBO95292 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.96□□□□□ -2.1
VAPBO95292 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.96□□□□□ -2.1
VAPBO95292 RPS3AP44-201ENST00000425466 790 ntBASIC1.96□□□□□ -2.1
VAPBO95292 AC013262.1-201ENST00000426710 252 ntBASIC1.96□□□□□ -2.1
VAPBO95292 AC093106.2-201ENST00000428212 385 ntBASIC1.96□□□□□ -2.1
VAPBO95292 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.96□□□□□ -2.1
VAPBO95292 NANOGP2-201ENST00000435391 727 ntBASIC1.96□□□□□ -2.1
VAPBO95292 AC004383.1-201ENST00000438135 289 ntBASIC1.96□□□□□ -2.1
VAPBO95292 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.96□□□□□ -2.1
VAPBO95292 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.96□□□□□ -2.1
VAPBO95292 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms