Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.38□□□□□ -1.87
RTN3O95197 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.38□□□□□ -1.87
RTN3O95197 AC087883.1-201ENST00000551882 391 ntBASIC3.38□□□□□ -1.87
RTN3O95197 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.38□□□□□ -1.87
RTN3O95197 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.38□□□□□ -1.87
RTN3O95197 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.38□□□□□ -1.87
RTN3O95197 AC006362.1-201ENST00000567392 174 ntBASIC3.38□□□□□ -1.87
RTN3O95197 MIR2682-201ENST00000580305 110 ntBASIC3.38□□□□□ -1.87
RTN3O95197 AC174048.1-201ENST00000603389 144 ntBASIC3.38□□□□□ -1.87
RTN3O95197 AC004805.2-201ENST00000605382 482 ntBASIC3.38□□□□□ -1.87
RTN3O95197 AC004852.3-201ENST00000614131 326 ntBASIC3.38□□□□□ -1.87
RTN3O95197 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.38□□□□□ -1.87
RTN3O95197 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.38□□□□□ -1.87
RTN3O95197 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.38□□□□□ -1.87
RTN3O95197 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RTN3O95197 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.38□□□□□ -1.87
RTN3O95197 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.38□□□□□ -1.87
RTN3O95197 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
RTN3O95197 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RTN3O95197 RNU6-512P-201ENST00000364438 103 ntBASIC3.37□□□□□ -1.87
RTN3O95197 CD24P4-201ENST00000382840 243 ntBASIC3.37□□□□□ -1.87
RTN3O95197 SNORA75-201ENST00000384158 137 ntBASIC3.37□□□□□ -1.87
RTN3O95197 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.37□□□□□ -1.87
RTN3O95197 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.37□□□□□ -1.87
RTN3O95197 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.37□□□□□ -1.87
RTN3O95197 MTND3P17-201ENST00000416968 344 ntBASIC3.37□□□□□ -1.87
RTN3O95197 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.37□□□□□ -1.87
RTN3O95197 AL139281.1-201ENST00000422120 335 ntBASIC3.37□□□□□ -1.87
RTN3O95197 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.37□□□□□ -1.87
RTN3O95197 CECR9-201ENST00000453421 199 ntBASIC3.37□□□□□ -1.87
RTN3O95197 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.37□□□□□ -1.87
RTN3O95197 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.37□□□□□ -1.87
RTN3O95197 AC233702.1-201ENST00000482905 502 ntBASIC3.37□□□□□ -1.87
RTN3O95197 RPL39P36-201ENST00000490784 156 ntBASIC3.37□□□□□ -1.87
RTN3O95197 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.37□□□□□ -1.87
RTN3O95197 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.37□□□□□ -1.87
RTN3O95197 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
RTN3O95197 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RTN3O95197 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.37□□□□□ -1.87
RTN3O95197 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.37□□□□□ -1.87
RTN3O95197 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.37□□□□□ -1.87
RTN3O95197 AL391261.3-201ENST00000557194 520 ntBASIC3.37□□□□□ -1.87
RTN3O95197 AC010653.1-201ENST00000571108 881 ntBASIC3.37□□□□□ -1.87
RTN3O95197 MTCO3P24-201ENST00000572729 782 ntBASIC3.37□□□□□ -1.87
RTN3O95197 AL133393.1-201ENST00000603277 287 ntBASIC3.37□□□□□ -1.87
RTN3O95197 AL627309.6-201ENST00000606857 840 ntBASIC3.37□□□□□ -1.87
RTN3O95197 AC009090.3-201ENST00000616553 565 ntBASIC3.37□□□□□ -1.87
RTN3O95197 AC072046.2-201ENST00000618366 268 ntBASIC3.37□□□□□ -1.87
RTN3O95197 AC018692.3-201ENST00000623929 123 ntBASIC3.37□□□□□ -1.87
RTN3O95197 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RTN3O95197 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.37□□□□□ -1.87
RTN3O95197 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.37□□□□□ -1.87
RTN3O95197 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RTN3O95197 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
RTN3O95197 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RTN3O95197 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RTN3O95197 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.37□□□□□ -1.87
RTN3O95197 AC093831.2-201ENST00000624393 3427 ntBASIC3.37□□□□□ -1.87
RTN3O95197 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RTN3O95197 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RTN3O95197 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
RTN3O95197 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RTN3O95197 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
RTN3O95197 RNU6-288P-201ENST00000363690 104 ntBASIC3.36□□□□□ -1.87
RTN3O95197 RNA5SP139-201ENST00000364340 117 ntBASIC3.36□□□□□ -1.87
RTN3O95197 RNU6-169P-201ENST00000365336 107 ntBASIC3.36□□□□□ -1.87
RTN3O95197 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RTN3O95197 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.36□□□□□ -1.87
RTN3O95197 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.36□□□□□ -1.87
RTN3O95197 RNU6-1027P-201ENST00000383998 107 ntBASIC3.36□□□□□ -1.87
RTN3O95197 RNU6-348P-201ENST00000384386 107 ntBASIC3.36□□□□□ -1.87
RTN3O95197 RPS12P24-201ENST00000412619 387 ntBASIC3.36□□□□□ -1.87
RTN3O95197 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.36□□□□□ -1.87
RTN3O95197 RPL31P35-201ENST00000431058 377 ntBASIC3.36□□□□□ -1.87
RTN3O95197 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.36□□□□□ -1.87
RTN3O95197 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.36□□□□□ -1.87
RTN3O95197 RPL36AP6-201ENST00000435770 321 ntBASIC3.36□□□□□ -1.87
RTN3O95197 AL031667.1-201ENST00000440222 725 ntBASIC3.36□□□□□ -1.87
RTN3O95197 RPS24P13-201ENST00000442520 397 ntBASIC3.36□□□□□ -1.87
RTN3O95197 KLF3P2-201ENST00000465138 268 ntBASIC3.36□□□□□ -1.87
RTN3O95197 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.36□□□□□ -1.87
RTN3O95197 AC022447.1-201ENST00000515358 464 ntBASIC3.36□□□□□ -1.87
RTN3O95197 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.36□□□□□ -1.87
RTN3O95197 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.36□□□□□ -1.87
RTN3O95197 MIR98-201ENST00000606724 119 ntBASIC3.36□□□□□ -1.87
RTN3O95197 AC006566.1-201ENST00000608943 513 ntBASIC3.36□□□□□ -1.87
RTN3O95197 AC048344.4-201ENST00000619744 527 ntBASIC3.36□□□□□ -1.87
RTN3O95197 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RTN3O95197 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.36□□□□□ -1.87
RTN3O95197 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.35□□□□□ -1.87
RTN3O95197 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RTN3O95197 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
RTN3O95197 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RTN3O95197 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.35□□□□□ -1.87
RTN3O95197 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.35□□□□□ -1.87
RTN3O95197 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RTN3O95197 OR5J1P-201ENST00000313544 939 ntBASIC3.35□□□□□ -1.87
RTN3O95197 RNA5SP374-201ENST00000362939 125 ntBASIC3.35□□□□□ -1.87
RTN3O95197 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.35□□□□□ -1.87
RTN3O95197 RNU6-190P-201ENST00000384154 102 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms