Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.12□□□□□ -2.07
SEMA3DO95025 AC022306.3-201ENST00000619930 550 ntBASIC2.12□□□□□ -2.07
SEMA3DO95025 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SEMA3DO95025 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
SEMA3DO95025 KPNA2P1-201ENST00000458289 1591 ntBASIC2.11□□□□□ -2.07
SEMA3DO95025 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SEMA3DO95025 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.11□□□□□ -2.07
SEMA3DO95025 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.11□□□□□ -2.07
SEMA3DO95025 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.11□□□□□ -2.07
SEMA3DO95025 SNORA3A-201ENST00000364113 130 ntBASIC2.11□□□□□ -2.07
SEMA3DO95025 RNU6-140P-201ENST00000384566 108 ntBASIC2.11□□□□□ -2.07
SEMA3DO95025 RNU6-636P-201ENST00000384598 107 ntBASIC2.11□□□□□ -2.07
SEMA3DO95025 MIR221-201ENST00000385135 110 ntBASIC2.11□□□□□ -2.07
SEMA3DO95025 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.11□□□□□ -2.07
SEMA3DO95025 MTND1P21-201ENST00000412991 285 ntBASIC2.11□□□□□ -2.07
SEMA3DO95025 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.11□□□□□ -2.07
SEMA3DO95025 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.11□□□□□ -2.07
SEMA3DO95025 USP9YP24-201ENST00000434374 697 ntBASIC2.11□□□□□ -2.07
SEMA3DO95025 MTND3P1-201ENST00000441336 220 ntBASIC2.11□□□□□ -2.07
SEMA3DO95025 USP9YP17-201ENST00000444617 696 ntBASIC2.11□□□□□ -2.07
SEMA3DO95025 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SEMA3DO95025 HIGD1AP2-201ENST00000446367 280 ntBASIC2.11□□□□□ -2.07
SEMA3DO95025 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.11□□□□□ -2.07
SEMA3DO95025 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.11□□□□□ -2.07
SEMA3DO95025 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.11□□□□□ -2.07
SEMA3DO95025 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.11□□□□□ -2.07
SEMA3DO95025 AC104090.1-201ENST00000506341 1171 ntBASIC2.11□□□□□ -2.07
SEMA3DO95025 HMGN1P28-201ENST00000521340 364 ntBASIC2.11□□□□□ -2.07
SEMA3DO95025 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.11□□□□□ -2.07
SEMA3DO95025 SNRPGP18-201ENST00000553000 214 ntBASIC2.11□□□□□ -2.07
SEMA3DO95025 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.11□□□□□ -2.07
SEMA3DO95025 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.11□□□□□ -2.07
SEMA3DO95025 AC022662.1-201ENST00000580252 331 ntBASIC2.11□□□□□ -2.07
SEMA3DO95025 AL161729.4-201ENST00000604650 476 ntBASIC2.11□□□□□ -2.07
SEMA3DO95025 AL158042.1-201ENST00000605338 460 ntBASIC2.11□□□□□ -2.07
SEMA3DO95025 SDR42E1P2-201ENST00000614861 481 ntBASIC2.11□□□□□ -2.07
SEMA3DO95025 AL136981.2-201ENST00000617319 734 ntBASIC2.11□□□□□ -2.07
SEMA3DO95025 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SEMA3DO95025 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SEMA3DO95025 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SEMA3DO95025 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SEMA3DO95025 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.1□□□□□ -2.07
SEMA3DO95025 RNU6-906P-201ENST00000384700 70 ntBASIC2.1□□□□□ -2.07
SEMA3DO95025 BTF3P7-201ENST00000407097 488 ntBASIC2.1□□□□□ -2.07
SEMA3DO95025 RNU2-33P-201ENST00000410344 192 ntBASIC2.1□□□□□ -2.07
SEMA3DO95025 MTCO1P17-201ENST00000411522 491 ntBASIC2.1□□□□□ -2.07
SEMA3DO95025 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SEMA3DO95025 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
SEMA3DO95025 ZNF863P-201ENST00000426746 417 ntBASIC2.1□□□□□ -2.07
SEMA3DO95025 TXNL1P1-201ENST00000429528 554 ntBASIC2.1□□□□□ -2.07
SEMA3DO95025 UBE2FP3-201ENST00000436366 524 ntBASIC2.1□□□□□ -2.07
SEMA3DO95025 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.1□□□□□ -2.07
SEMA3DO95025 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.1□□□□□ -2.07
SEMA3DO95025 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.1□□□□□ -2.07
SEMA3DO95025 MRPS17P3-201ENST00000465453 385 ntBASIC2.1□□□□□ -2.07
SEMA3DO95025 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.1□□□□□ -2.07
SEMA3DO95025 RPS20P22-201ENST00000473700 357 ntBASIC2.1□□□□□ -2.07
SEMA3DO95025 RPL23AP49-201ENST00000492925 468 ntBASIC2.1□□□□□ -2.07
SEMA3DO95025 AC022493.1-201ENST00000492984 337 ntBASIC2.1□□□□□ -2.07
SEMA3DO95025 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.1□□□□□ -2.07
SEMA3DO95025 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.1□□□□□ -2.07
SEMA3DO95025 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.1□□□□□ -2.07
SEMA3DO95025 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.1□□□□□ -2.07
SEMA3DO95025 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.1□□□□□ -2.07
SEMA3DO95025 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.1□□□□□ -2.07
SEMA3DO95025 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.1□□□□□ -2.07
SEMA3DO95025 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.1□□□□□ -2.07
SEMA3DO95025 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.1□□□□□ -2.07
SEMA3DO95025 AL512310.1-201ENST00000548639 172 ntBASIC2.1□□□□□ -2.07
SEMA3DO95025 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.1□□□□□ -2.07
SEMA3DO95025 AC087465.1-201ENST00000560574 245 ntBASIC2.1□□□□□ -2.07
SEMA3DO95025 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.1□□□□□ -2.07
SEMA3DO95025 AC136601.2-201ENST00000604356 474 ntBASIC2.1□□□□□ -2.07
SEMA3DO95025 APOOP1-201ENST00000604695 592 ntBASIC2.1□□□□□ -2.07
SEMA3DO95025 AC112220.3-201ENST00000605502 502 ntBASIC2.1□□□□□ -2.07
SEMA3DO95025 AL121917.1-203ENST00000605534 577 ntBASIC2.1□□□□□ -2.07
SEMA3DO95025 AL139022.2-201ENST00000606934 443 ntBASIC2.1□□□□□ -2.07
SEMA3DO95025 AC009974.1-201ENST00000608881 455 ntBASIC2.1□□□□□ -2.07
SEMA3DO95025 AL109620.1-201ENST00000618738 1197 ntBASIC2.1□□□□□ -2.07
SEMA3DO95025 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.1□□□□□ -2.07
SEMA3DO95025 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.1□□□□□ -2.07
SEMA3DO95025 AC112204.3-201ENST00000623822 332 ntBASIC2.1□□□□□ -2.07
SEMA3DO95025 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.1□□□□□ -2.07
SEMA3DO95025 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.09□□□□□ -2.07
SEMA3DO95025 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.09□□□□□ -2.07
SEMA3DO95025 FAM133CP-201ENST00000332869 704 ntBASIC2.09□□□□□ -2.07
SEMA3DO95025 RNU6-884P-201ENST00000363889 107 ntBASIC2.09□□□□□ -2.07
SEMA3DO95025 SNORA4.1-201ENST00000364263 144 ntBASIC2.09□□□□□ -2.07
SEMA3DO95025 RNU1-73P-201ENST00000383971 164 ntBASIC2.09□□□□□ -2.07
SEMA3DO95025 AL445529.1-201ENST00000398713 389 ntBASIC2.09□□□□□ -2.07
SEMA3DO95025 RNU6-757P-201ENST00000410334 100 ntBASIC2.09□□□□□ -2.07
SEMA3DO95025 RNU4-53P-201ENST00000410828 140 ntBASIC2.09□□□□□ -2.07
SEMA3DO95025 PIGPP2-201ENST00000411569 458 ntBASIC2.09□□□□□ -2.07
SEMA3DO95025 HMGB1P11-201ENST00000413899 637 ntBASIC2.09□□□□□ -2.07
SEMA3DO95025 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.09□□□□□ -2.07
SEMA3DO95025 AC083875.1-201ENST00000419509 405 ntBASIC2.09□□□□□ -2.07
SEMA3DO95025 AL445669.1-201ENST00000426743 755 ntBASIC2.09□□□□□ -2.07
SEMA3DO95025 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.09□□□□□ -2.07
SEMA3DO95025 AC236972.1-201ENST00000433225 199 ntBASIC2.09□□□□□ -2.07
SEMA3DO95025 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms