Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC135507.2-201ENST00000612443 309 ntBASIC3.14□□□□□ -1.91
BEST1O76090 PISRT1-201ENST00000626175 531 ntBASIC3.14□□□□□ -1.91
BEST1O76090 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.14□□□□□ -1.91
BEST1O76090 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.13□□□□□ -1.91
BEST1O76090 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
BEST1O76090 FARSBP1-201ENST00000435808 1778 ntBASIC3.13□□□□□ -1.91
BEST1O76090 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
BEST1O76090 RNU6-778P-201ENST00000363269 103 ntBASIC3.13□□□□□ -1.91
BEST1O76090 U8.3-201ENST00000363321 132 ntBASIC3.13□□□□□ -1.91
BEST1O76090 RNU6-525P-201ENST00000363685 104 ntBASIC3.13□□□□□ -1.91
BEST1O76090 RNU6-288P-201ENST00000363690 104 ntBASIC3.13□□□□□ -1.91
BEST1O76090 RNU6-946P-201ENST00000383878 107 ntBASIC3.13□□□□□ -1.91
BEST1O76090 RNU1-73P-201ENST00000383971 164 ntBASIC3.13□□□□□ -1.91
BEST1O76090 SNORA46-201ENST00000384762 135 ntBASIC3.13□□□□□ -1.91
BEST1O76090 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.13□□□□□ -1.91
BEST1O76090 RNU6-193P-201ENST00000410977 107 ntBASIC3.13□□□□□ -1.91
BEST1O76090 AC009414.1-201ENST00000427200 443 ntBASIC3.13□□□□□ -1.91
BEST1O76090 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.13□□□□□ -1.91
BEST1O76090 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.13□□□□□ -1.91
BEST1O76090 AL139132.1-201ENST00000431587 344 ntBASIC3.13□□□□□ -1.91
BEST1O76090 RPL36AP6-201ENST00000435770 321 ntBASIC3.13□□□□□ -1.91
BEST1O76090 RPL23AP22-201ENST00000437556 453 ntBASIC3.13□□□□□ -1.91
BEST1O76090 RPS24P1-201ENST00000438550 371 ntBASIC3.13□□□□□ -1.91
BEST1O76090 WASF1P1-201ENST00000447560 1131 ntBASIC3.13□□□□□ -1.91
BEST1O76090 ST13P20-201ENST00000447996 1065 ntBASIC3.13□□□□□ -1.91
BEST1O76090 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.13□□□□□ -1.91
BEST1O76090 AC007182.2-201ENST00000489251 402 ntBASIC3.13□□□□□ -1.91
BEST1O76090 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.13□□□□□ -1.91
BEST1O76090 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.13□□□□□ -1.91
BEST1O76090 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.13□□□□□ -1.91
BEST1O76090 Y_RNA.688-201ENST00000516565 95 ntBASIC3.13□□□□□ -1.91
BEST1O76090 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.13□□□□□ -1.91
BEST1O76090 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.13□□□□□ -1.91
BEST1O76090 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.13□□□□□ -1.91
BEST1O76090 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.13□□□□□ -1.91
BEST1O76090 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.13□□□□□ -1.91
BEST1O76090 H3F3AP1-201ENST00000559984 334 ntBASIC3.13□□□□□ -1.91
BEST1O76090 NRBF2P1-201ENST00000587407 859 ntBASIC3.13□□□□□ -1.91
BEST1O76090 CLIC4P2-201ENST00000601934 717 ntBASIC3.13□□□□□ -1.91
BEST1O76090 AC015871.2-201ENST00000603605 948 ntBASIC3.13□□□□□ -1.91
BEST1O76090 AL035413.2-201ENST00000604801 525 ntBASIC3.13□□□□□ -1.91
BEST1O76090 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
BEST1O76090 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.13□□□□□ -1.91
BEST1O76090 CR848007.1-201ENST00000442354 1699 ntBASIC3.13□□□□□ -1.91
BEST1O76090 FAM35CP-201ENST00000554755 2470 ntBASIC3.12□□□□□ -1.91
BEST1O76090 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
BEST1O76090 NDUFB4P4-201ENST00000404822 243 ntBASIC3.12□□□□□ -1.91
BEST1O76090 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.12□□□□□ -1.91
BEST1O76090 AC127391.1-201ENST00000411737 98 ntBASIC3.12□□□□□ -1.91
BEST1O76090 BPY2DP-201ENST00000422208 265 ntBASIC3.12□□□□□ -1.91
BEST1O76090 AC007283.2-201ENST00000424739 197 ntBASIC3.12□□□□□ -1.91
BEST1O76090 AL358075.3-201ENST00000426289 226 ntBASIC3.12□□□□□ -1.91
BEST1O76090 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
BEST1O76090 GTF2IP20-201ENST00000431663 360 ntBASIC3.12□□□□□ -1.91
BEST1O76090 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.12□□□□□ -1.91
BEST1O76090 AC098831.1-201ENST00000440661 216 ntBASIC3.12□□□□□ -1.91
BEST1O76090 MTATP6P7-201ENST00000453315 681 ntBASIC3.12□□□□□ -1.91
BEST1O76090 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.12□□□□□ -1.91
BEST1O76090 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.12□□□□□ -1.91
BEST1O76090 RAP1BP2-201ENST00000478270 544 ntBASIC3.12□□□□□ -1.91
BEST1O76090 RPS29P20-201ENST00000489592 171 ntBASIC3.12□□□□□ -1.91
BEST1O76090 AC092185.1-201ENST00000491371 97 ntBASIC3.12□□□□□ -1.91
BEST1O76090 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.12□□□□□ -1.91
BEST1O76090 RNU1-103P-201ENST00000516502 125 ntBASIC3.12□□□□□ -1.91
BEST1O76090 Vault.3-201ENST00000516676 95 ntBASIC3.12□□□□□ -1.91
BEST1O76090 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.12□□□□□ -1.91
BEST1O76090 TRAV37-201ENST00000553906 342 ntBASIC3.12□□□□□ -1.91
BEST1O76090 EIF4BP1-201ENST00000554881 351 ntBASIC3.12□□□□□ -1.91
BEST1O76090 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.12□□□□□ -1.91
BEST1O76090 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.12□□□□□ -1.91
BEST1O76090 AC020895.1-201ENST00000595362 272 ntBASIC3.12□□□□□ -1.91
BEST1O76090 AL133173.2-201ENST00000614270 90 ntBASIC3.12□□□□□ -1.91
BEST1O76090 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
BEST1O76090 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.12□□□□□ -1.91
BEST1O76090 UCA1.1-201ENST00000620952 75 ntBASIC3.12□□□□□ -1.91
BEST1O76090 AC022079.1-201ENST00000621546 602 ntBASIC3.12□□□□□ -1.91
BEST1O76090 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
BEST1O76090 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
BEST1O76090 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.12□□□□□ -1.91
BEST1O76090 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
BEST1O76090 AL035425.3-201ENST00000564206 4996 ntBASIC3.11□□□□□ -1.91
BEST1O76090 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.11□□□□□ -1.91
BEST1O76090 AC110491.1-201ENST00000562191 2010 ntBASIC3.11□□□□□ -1.91
BEST1O76090 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
BEST1O76090 MIR148B-201ENST00000362252 99 ntBASIC3.11□□□□□ -1.91
BEST1O76090 RNY4P34-201ENST00000364779 95 ntBASIC3.11□□□□□ -1.91
BEST1O76090 SNORA20.2-201ENST00000383922 131 ntBASIC3.11□□□□□ -1.91
BEST1O76090 MIR558-201ENST00000384920 94 ntBASIC3.11□□□□□ -1.91
BEST1O76090 MIR301A-201ENST00000385261 86 ntBASIC3.11□□□□□ -1.91
BEST1O76090 RNA5SP293-201ENST00000410527 113 ntBASIC3.11□□□□□ -1.91
BEST1O76090 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.11□□□□□ -1.91
BEST1O76090 EEF1A1P41-201ENST00000414667 207 ntBASIC3.11□□□□□ -1.91
BEST1O76090 SKA2P1-201ENST00000425592 390 ntBASIC3.11□□□□□ -1.91
BEST1O76090 AC093106.2-201ENST00000428212 385 ntBASIC3.11□□□□□ -1.91
BEST1O76090 MED13P1-201ENST00000428342 171 ntBASIC3.11□□□□□ -1.91
BEST1O76090 AL592045.1-201ENST00000429867 352 ntBASIC3.11□□□□□ -1.91
BEST1O76090 AC009961.2-201ENST00000435771 251 ntBASIC3.11□□□□□ -1.91
BEST1O76090 RPS15AP5-201ENST00000436276 388 ntBASIC3.11□□□□□ -1.91
BEST1O76090 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.11□□□□□ -1.91
BEST1O76090 AC125238.1-201ENST00000448842 249 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms