Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC078899.3-201ENST00000599065 212 ntBASIC3.16□□□□□ -1.9
GPC4O75487 AC078795.2-201ENST00000602835 1252 ntBASIC3.16□□□□□ -1.9
GPC4O75487 AL133393.1-201ENST00000603277 287 ntBASIC3.16□□□□□ -1.9
GPC4O75487 Z84480.1-201ENST00000605131 311 ntBASIC3.16□□□□□ -1.9
GPC4O75487 AL365204.3-201ENST00000612448 685 ntBASIC3.16□□□□□ -1.9
GPC4O75487 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.16□□□□□ -1.9
GPC4O75487 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.16□□□□□ -1.9
GPC4O75487 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
GPC4O75487 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
GPC4O75487 AC092447.7-201ENST00000422212 1621 ntBASIC3.15□□□□□ -1.9
GPC4O75487 MTND5P26-201ENST00000426018 1752 ntBASIC3.15□□□□□ -1.9
GPC4O75487 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
GPC4O75487 FTLP6-201ENST00000355274 422 ntBASIC3.15□□□□□ -1.91
GPC4O75487 RNU6-259P-201ENST00000383999 107 ntBASIC3.15□□□□□ -1.91
GPC4O75487 RNU6-641P-201ENST00000384006 107 ntBASIC3.15□□□□□ -1.91
GPC4O75487 RNU6-217P-201ENST00000384164 104 ntBASIC3.15□□□□□ -1.91
GPC4O75487 SNORA24.1-201ENST00000384401 135 ntBASIC3.15□□□□□ -1.91
GPC4O75487 RNU6-140P-201ENST00000384566 108 ntBASIC3.15□□□□□ -1.91
GPC4O75487 RPL21P3-201ENST00000395517 478 ntBASIC3.15□□□□□ -1.91
GPC4O75487 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.15□□□□□ -1.91
GPC4O75487 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.15□□□□□ -1.91
GPC4O75487 GPR143P-201ENST00000434155 205 ntBASIC3.15□□□□□ -1.91
GPC4O75487 RPS20P5-201ENST00000434808 360 ntBASIC3.15□□□□□ -1.91
GPC4O75487 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.15□□□□□ -1.91
GPC4O75487 DDX3P2-201ENST00000446138 111 ntBASIC3.15□□□□□ -1.91
GPC4O75487 AC093392.2-201ENST00000450682 337 ntBASIC3.15□□□□□ -1.91
GPC4O75487 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.15□□□□□ -1.91
GPC4O75487 CECR9-201ENST00000453421 199 ntBASIC3.15□□□□□ -1.91
GPC4O75487 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.15□□□□□ -1.91
GPC4O75487 AC146507.2-201ENST00000460608 476 ntBASIC3.15□□□□□ -1.91
GPC4O75487 RPL32P34-201ENST00000486380 400 ntBASIC3.15□□□□□ -1.91
GPC4O75487 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.15□□□□□ -1.91
GPC4O75487 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.15□□□□□ -1.91
GPC4O75487 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.15□□□□□ -1.91
GPC4O75487 RPL37P25-201ENST00000507308 276 ntBASIC3.15□□□□□ -1.91
GPC4O75487 AC074250.1-201ENST00000511117 192 ntBASIC3.15□□□□□ -1.91
GPC4O75487 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.15□□□□□ -1.91
GPC4O75487 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.15□□□□□ -1.91
GPC4O75487 SNORA31.1-201ENST00000515993 133 ntBASIC3.15□□□□□ -1.91
GPC4O75487 SNORA31.5-201ENST00000516190 133 ntBASIC3.15□□□□□ -1.91
GPC4O75487 RNA5SP290-201ENST00000517133 127 ntBASIC3.15□□□□□ -1.91
GPC4O75487 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.15□□□□□ -1.91
GPC4O75487 AP003072.2-201ENST00000527756 676 ntBASIC3.15□□□□□ -1.91
GPC4O75487 AP000867.2-201ENST00000532468 320 ntBASIC3.15□□□□□ -1.91
GPC4O75487 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.15□□□□□ -1.91
GPC4O75487 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.15□□□□□ -1.91
GPC4O75487 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.15□□□□□ -1.91
GPC4O75487 SRGNP1-201ENST00000603392 451 ntBASIC3.15□□□□□ -1.91
GPC4O75487 AC104763.2-201ENST00000604179 382 ntBASIC3.15□□□□□ -1.91
GPC4O75487 HULC.1-201ENST00000612720 240 ntBASIC3.15□□□□□ -1.91
GPC4O75487 AC130324.3-201ENST00000614165 542 ntBASIC3.15□□□□□ -1.91
GPC4O75487 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.15□□□□□ -1.91
GPC4O75487 AC006111.3-201ENST00000622137 383 ntBASIC3.15□□□□□ -1.91
GPC4O75487 AC093648.1-201ENST00000623546 606 ntBASIC3.15□□□□□ -1.91
GPC4O75487 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.15□□□□□ -1.91
GPC4O75487 MTND5P42-201ENST00000637720 498 ntBASIC3.15□□□□□ -1.91
GPC4O75487 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.15□□□□□ -1.91
GPC4O75487 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
GPC4O75487 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
GPC4O75487 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.15□□□□□ -1.91
GPC4O75487 Y_RNA.159-201ENST00000363674 87 ntBASIC3.14□□□□□ -1.91
GPC4O75487 Y_RNA.245-201ENST00000364493 95 ntBASIC3.14□□□□□ -1.91
GPC4O75487 RN7SKP226-201ENST00000364912 300 ntBASIC3.14□□□□□ -1.91
GPC4O75487 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.14□□□□□ -1.91
GPC4O75487 RNU6-1035P-201ENST00000384477 107 ntBASIC3.14□□□□□ -1.91
GPC4O75487 RNU6-456P-201ENST00000384493 107 ntBASIC3.14□□□□□ -1.91
GPC4O75487 MIR887-201ENST00000401258 79 ntBASIC3.14□□□□□ -1.91
GPC4O75487 RPS12P24-201ENST00000412619 387 ntBASIC3.14□□□□□ -1.91
GPC4O75487 ELOCP14-201ENST00000428070 331 ntBASIC3.14□□□□□ -1.91
GPC4O75487 AL451074.3-201ENST00000437709 472 ntBASIC3.14□□□□□ -1.91
GPC4O75487 ELOCP7-201ENST00000439968 331 ntBASIC3.14□□□□□ -1.91
GPC4O75487 MTND4P25-201ENST00000441039 533 ntBASIC3.14□□□□□ -1.91
GPC4O75487 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.14□□□□□ -1.91
GPC4O75487 RPL12P25-201ENST00000455592 494 ntBASIC3.14□□□□□ -1.91
GPC4O75487 snoU13.28-201ENST00000459235 104 ntBASIC3.14□□□□□ -1.91
GPC4O75487 snoU13.22-201ENST00000459428 104 ntBASIC3.14□□□□□ -1.91
GPC4O75487 RPS3AP17-201ENST00000472594 777 ntBASIC3.14□□□□□ -1.91
GPC4O75487 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.14□□□□□ -1.91
GPC4O75487 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.14□□□□□ -1.91
GPC4O75487 Y_RNA.689-201ENST00000516589 107 ntBASIC3.14□□□□□ -1.91
GPC4O75487 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.14□□□□□ -1.91
GPC4O75487 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
GPC4O75487 ATP5F1P5-201ENST00000526403 760 ntBASIC3.14□□□□□ -1.91
GPC4O75487 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.14□□□□□ -1.91
GPC4O75487 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.14□□□□□ -1.91
GPC4O75487 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.14□□□□□ -1.91
GPC4O75487 AC068135.2-201ENST00000569293 1028 ntBASIC3.14□□□□□ -1.91
GPC4O75487 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.14□□□□□ -1.91
GPC4O75487 AC068790.2-201ENST00000602601 557 ntBASIC3.14□□□□□ -1.91
GPC4O75487 MIR7112-201ENST00000616126 65 ntBASIC3.14□□□□□ -1.91
GPC4O75487 AC138649.3-201ENST00000622154 254 ntBASIC3.14□□□□□ -1.91
GPC4O75487 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.14□□□□□ -1.91
GPC4O75487 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.14□□□□□ -1.91
GPC4O75487 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
GPC4O75487 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
GPC4O75487 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
GPC4O75487 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
GPC4O75487 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.13□□□□□ -1.91
GPC4O75487 MIR208A-201ENST00000362287 71 ntBASIC3.13□□□□□ -1.91
GPC4O75487 Y_RNA.367-201ENST00000365544 101 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms