Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.32□□□□□ -2.36
USH2AO75445 AC004817.2-201ENST00000561794 651 ntBASIC0.32□□□□□ -2.36
USH2AO75445 AC010620.1-201ENST00000601088 1102 ntBASIC0.32□□□□□ -2.36
USH2AO75445 AC068831.7-201ENST00000616954 363 ntBASIC0.32□□□□□ -2.36
USH2AO75445 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.32□□□□□ -2.36
USH2AO75445 Y_RNA.52-201ENST00000362760 96 ntBASIC0.32□□□□□ -2.36
USH2AO75445 Y_RNA.55-201ENST00000362797 102 ntBASIC0.32□□□□□ -2.36
USH2AO75445 RNU6-1064P-201ENST00000410626 104 ntBASIC0.32□□□□□ -2.36
USH2AO75445 MTCO3P4-201ENST00000419236 787 ntBASIC0.32□□□□□ -2.36
USH2AO75445 AL357134.1-201ENST00000445848 426 ntBASIC0.32□□□□□ -2.36
USH2AO75445 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.32□□□□□ -2.36
USH2AO75445 AC005410.1-202ENST00000460347 485 ntBASIC0.32□□□□□ -2.36
USH2AO75445 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC0.32□□□□□ -2.36
USH2AO75445 AC023932.2-201ENST00000603176 175 ntBASIC0.32□□□□□ -2.36
USH2AO75445 AC011468.4-201ENST00000603942 409 ntBASIC0.32□□□□□ -2.36
USH2AO75445 AC106052.1-201ENST00000608029 497 ntBASIC0.32□□□□□ -2.36
USH2AO75445 AL356473.1-201ENST00000406203 1408 ntBASIC0.32□□□□□ -2.36
USH2AO75445 Y_RNA.490-201ENST00000384413 102 ntBASIC0.32□□□□□ -2.36
USH2AO75445 RPS25P9-201ENST00000435591 252 ntBASIC0.32□□□□□ -2.36
USH2AO75445 RPS29P8-201ENST00000445109 171 ntBASIC0.32□□□□□ -2.36
USH2AO75445 Z96811.1-201ENST00000445880 108 ntBASIC0.32□□□□□ -2.36
USH2AO75445 AC091435.1-201ENST00000505442 584 ntBASIC0.32□□□□□ -2.36
USH2AO75445 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC0.32□□□□□ -2.36
USH2AO75445 SNORD116-26-201ENST00000516006 96 ntBASIC0.32□□□□□ -2.36
USH2AO75445 AC021646.1-201ENST00000605469 484 ntBASIC0.32□□□□□ -2.36
USH2AO75445 AP003485.1-201ENST00000625093 753 ntBASIC0.32□□□□□ -2.36
USH2AO75445 RNU2-40P-201ENST00000410833 196 ntBASIC0.31□□□□□ -2.36
USH2AO75445 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.31□□□□□ -2.36
USH2AO75445 RPL7P31-201ENST00000450192 724 ntBASIC0.31□□□□□ -2.36
USH2AO75445 TPT1P8-201ENST00000510120 555 ntBASIC0.31□□□□□ -2.36
USH2AO75445 NOP56P3-201ENST00000549457 385 ntBASIC0.31□□□□□ -2.36
USH2AO75445 LINC00557-201ENST00000563184 1279 ntBASIC0.31□□□□□ -2.36
USH2AO75445 MIR5190-201ENST00000581537 80 ntBASIC0.31□□□□□ -2.36
USH2AO75445 ELOCP5-201ENST00000604924 333 ntBASIC0.31□□□□□ -2.36
USH2AO75445 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC0.31□□□□□ -2.36
USH2AO75445 MIR101-1-201ENST00000362265 75 ntBASIC0.31□□□□□ -2.36
USH2AO75445 AC092648.1-201ENST00000425870 423 ntBASIC0.31□□□□□ -2.36
USH2AO75445 AC117503.1-201ENST00000472241 394 ntBASIC0.31□□□□□ -2.36
USH2AO75445 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.31□□□□□ -2.36
USH2AO75445 SNORA48.11-201ENST00000517015 89 ntBASIC0.31□□□□□ -2.36
USH2AO75445 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.31□□□□□ -2.36
USH2AO75445 AC020658.4-201ENST00000613987 684 ntBASIC0.31□□□□□ -2.36
USH2AO75445 AC091304.6-201ENST00000619761 202 ntBASIC0.31□□□□□ -2.36
USH2AO75445 Clostridiales-1.3-201ENST00000637703 147 ntBASIC0.31□□□□□ -2.36
USH2AO75445 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC0.31□□□□□ -2.36
USH2AO75445 AC080100.1-201ENST00000624239 5356 ntBASIC0.31□□□□□ -2.36
USH2AO75445 AC245060.5-201ENST00000610778 3293 ntBASIC0.31□□□□□ -2.36
USH2AO75445 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.31□□□□□ -2.36
USH2AO75445 AL356379.1-201ENST00000414105 126 ntBASIC0.31□□□□□ -2.36
USH2AO75445 TRAPPC2P10-201ENST00000415662 323 ntBASIC0.31□□□□□ -2.36
USH2AO75445 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC0.31□□□□□ -2.36
USH2AO75445 RPL22P13-201ENST00000493291 347 ntBASIC0.31□□□□□ -2.36
USH2AO75445 RNU6-970P-201ENST00000516312 107 ntBASIC0.31□□□□□ -2.36
USH2AO75445 AL355472.4-201ENST00000610233 626 ntBASIC0.31□□□□□ -2.36
USH2AO75445 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.31□□□□□ -2.36
USH2AO75445 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC0.31□□□□□ -2.36
USH2AO75445 MIR508-201ENST00000384857 115 ntBASIC0.31□□□□□ -2.36
USH2AO75445 SSXP9-201ENST00000417503 292 ntBASIC0.31□□□□□ -2.36
USH2AO75445 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.31□□□□□ -2.36
USH2AO75445 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.31□□□□□ -2.36
USH2AO75445 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.31□□□□□ -2.36
USH2AO75445 UBE2L4-201ENST00000587688 464 ntBASIC0.31□□□□□ -2.36
USH2AO75445 AC068620.4-201ENST00000636730 1182 ntBASIC0.31□□□□□ -2.36
USH2AO75445 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
USH2AO75445 Y_RNA.28-201ENST00000362554 111 ntBASIC0.31□□□□□ -2.36
USH2AO75445 Y_RNA.65-201ENST00000362846 100 ntBASIC0.31□□□□□ -2.36
USH2AO75445 HMGB1P17-201ENST00000403495 628 ntBASIC0.31□□□□□ -2.36
USH2AO75445 MIR1285-1-201ENST00000408593 84 ntBASIC0.31□□□□□ -2.36
USH2AO75445 VN1R42P-201ENST00000424651 344 ntBASIC0.31□□□□□ -2.36
USH2AO75445 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.31□□□□□ -2.36
USH2AO75445 AC004383.1-201ENST00000438135 289 ntBASIC0.31□□□□□ -2.36
USH2AO75445 AC092754.2-201ENST00000463506 460 ntBASIC0.31□□□□□ -2.36
USH2AO75445 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC0.31□□□□□ -2.36
USH2AO75445 AC012443.1-201ENST00000605605 231 ntBASIC0.31□□□□□ -2.36
USH2AO75445 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.31□□□□□ -2.36
USH2AO75445 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.31□□□□□ -2.36
USH2AO75445 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
USH2AO75445 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
USH2AO75445 SNORD118-201ENST00000363593 134 ntBASIC0.3□□□□□ -2.36
USH2AO75445 Y_RNA.495-201ENST00000384435 112 ntBASIC0.3□□□□□ -2.36
USH2AO75445 FO393413.1-201ENST00000402892 195 ntBASIC0.3□□□□□ -2.36
USH2AO75445 HSPE1P26-201ENST00000405341 275 ntBASIC0.3□□□□□ -2.36
USH2AO75445 RNA5SP492-201ENST00000411330 114 ntBASIC0.3□□□□□ -2.36
USH2AO75445 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC0.3□□□□□ -2.36
USH2AO75445 AC087884.1-201ENST00000469738 328 ntBASIC0.3□□□□□ -2.36
USH2AO75445 RPS27P23-201ENST00000487608 251 ntBASIC0.3□□□□□ -2.36
USH2AO75445 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.3□□□□□ -2.36
USH2AO75445 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
USH2AO75445 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.3□□□□□ -2.36
USH2AO75445 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.3□□□□□ -2.36
USH2AO75445 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.3□□□□□ -2.36
USH2AO75445 AC079597.1-201ENST00000624306 508 ntBASIC0.3□□□□□ -2.36
USH2AO75445 RNU6-833P-201ENST00000363486 107 ntBASIC0.3□□□□□ -2.36
USH2AO75445 RNU6-923P-201ENST00000364753 107 ntBASIC0.3□□□□□ -2.36
USH2AO75445 Y_RNA.536-201ENST00000384621 113 ntBASIC0.3□□□□□ -2.36
USH2AO75445 Y_RNA.583-201ENST00000391033 113 ntBASIC0.3□□□□□ -2.36
USH2AO75445 RNU4ATAC16P-201ENST00000408512 126 ntBASIC0.3□□□□□ -2.36
USH2AO75445 ISCA1P1-201ENST00000426679 387 ntBASIC0.3□□□□□ -2.36
USH2AO75445 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC0.3□□□□□ -2.36
USH2AO75445 AC114322.1-201ENST00000506771 926 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms