Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AL360182.1-201ENST00000397433 468 ntBASIC2.53□□□□□ -2
TRIM3O75382 AL138827.1-201ENST00000402666 306 ntBASIC2.53□□□□□ -2
TRIM3O75382 AL592148.1-201ENST00000413568 445 ntBASIC2.53□□□□□ -2
TRIM3O75382 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.53□□□□□ -2
TRIM3O75382 USP9YP26-201ENST00000421008 661 ntBASIC2.53□□□□□ -2
TRIM3O75382 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.53□□□□□ -2
TRIM3O75382 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.53□□□□□ -2
TRIM3O75382 AC244035.1-201ENST00000430042 390 ntBASIC2.53□□□□□ -2
TRIM3O75382 AL365184.2-201ENST00000431139 435 ntBASIC2.53□□□□□ -2
TRIM3O75382 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.53□□□□□ -2
TRIM3O75382 TIMM9P1-201ENST00000436122 256 ntBASIC2.53□□□□□ -2
TRIM3O75382 CR769767.1-201ENST00000436337 346 ntBASIC2.53□□□□□ -2
TRIM3O75382 UBE2D3P1-201ENST00000436669 444 ntBASIC2.53□□□□□ -2
TRIM3O75382 RPL22P17-201ENST00000438729 315 ntBASIC2.53□□□□□ -2
TRIM3O75382 AC104389.3-201ENST00000445629 235 ntBASIC2.53□□□□□ -2
TRIM3O75382 AC020550.1-201ENST00000447385 163 ntBASIC2.53□□□□□ -2
TRIM3O75382 AC009961.3-201ENST00000449832 765 ntBASIC2.53□□□□□ -2
TRIM3O75382 ZNF114P1-201ENST00000453500 292 ntBASIC2.53□□□□□ -2
TRIM3O75382 RPL12P25-201ENST00000455592 494 ntBASIC2.53□□□□□ -2
TRIM3O75382 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.53□□□□□ -2
TRIM3O75382 AC138853.1-201ENST00000503549 823 ntBASIC2.53□□□□□ -2
TRIM3O75382 SUMO2P6-201ENST00000505273 288 ntBASIC2.53□□□□□ -2
TRIM3O75382 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.53□□□□□ -2
TRIM3O75382 MTND5P13-201ENST00000513046 1079 ntBASIC2.53□□□□□ -2
TRIM3O75382 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.53□□□□□ -2
TRIM3O75382 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.53□□□□□ -2
TRIM3O75382 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.53□□□□□ -2
TRIM3O75382 AC008015.1-201ENST00000555505 465 ntBASIC2.53□□□□□ -2
TRIM3O75382 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.53□□□□□ -2
TRIM3O75382 ZNF861P-201ENST00000588126 639 ntBASIC2.53□□□□□ -2
TRIM3O75382 AC008277.2-201ENST00000605196 797 ntBASIC2.53□□□□□ -2
TRIM3O75382 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.53□□□□□ -2
TRIM3O75382 AC103710.1-201ENST00000610003 901 ntBASIC2.53□□□□□ -2
TRIM3O75382 AL355816.2-201ENST00000610049 647 ntBASIC2.53□□□□□ -2
TRIM3O75382 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.53□□□□□ -2
TRIM3O75382 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.53□□□□□ -2
TRIM3O75382 PABPC1P9-201ENST00000426076 1612 ntBASIC2.53□□□□□ -2
TRIM3O75382 AC093536.2-201ENST00000565257 1406 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 AP000568.1-201ENST00000282964 442 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 FTLP6-201ENST00000355274 422 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 RNU6-501P-201ENST00000364072 100 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 RNU1-112P-201ENST00000364401 164 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 MIR9-1-201ENST00000385198 89 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 AL359634.1-202ENST00000404721 284 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM3O75382 RNA5SP21-201ENST00000410917 96 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 AC098614.2-201ENST00000426040 255 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 ZNF863P-201ENST00000426746 417 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 MTND5P25-201ENST00000430499 799 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 FCF1P1-201ENST00000432690 571 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 AL512286.1-201ENST00000439244 400 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 AC118469.1-201ENST00000442943 488 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM3O75382 RNU7-26P-201ENST00000458980 63 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 RPL23AP41-201ENST00000484754 458 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM3O75382 RNU6-1003P-201ENST00000517099 105 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM3O75382 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.52□□□□□ -2.01
TRIM3O75382 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.52□□□□□ -2.01
TRIM3O75382 PCMTD1P2-201ENST00000565017 355 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 AC091489.2-201ENST00000566263 604 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.52□□□□□ -2.01
TRIM3O75382 AC136601.2-201ENST00000604356 474 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 AL049779.4-201ENST00000604500 156 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 Z99289.3-201ENST00000605586 594 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 AC018638.7-201ENST00000605836 1114 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 BX664608.1-201ENST00000610519 487 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 AC004223.4-201ENST00000612426 332 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 AC090970.3-201ENST00000612566 866 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 AC093591.3-201ENST00000634516 308 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 MIR7515-201ENST00000637837 67 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 AC006927.3-201ENST00000638789 384 ntBASIC2.52□□□□□ -2.01
TRIM3O75382 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.52□□□□□ -2.01
TRIM3O75382 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.52□□□□□ -2.01
TRIM3O75382 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM3O75382 RNY4P24-201ENST00000362735 96 ntBASIC2.51□□□□□ -2.01
TRIM3O75382 RNU5F-6P-201ENST00000362979 116 ntBASIC2.51□□□□□ -2.01
TRIM3O75382 Y_RNA.560-201ENST00000384689 102 ntBASIC2.51□□□□□ -2.01
TRIM3O75382 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.51□□□□□ -2.01
TRIM3O75382 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.51□□□□□ -2.01
TRIM3O75382 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM3O75382 MRPL50P4-201ENST00000446432 475 ntBASIC2.51□□□□□ -2.01
TRIM3O75382 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM3O75382 AC108059.3-201ENST00000456388 214 ntBASIC2.51□□□□□ -2.01
TRIM3O75382 AC003982.1-202ENST00000469928 248 ntBASIC2.51□□□□□ -2.01
TRIM3O75382 AC004263.1-201ENST00000479327 332 ntBASIC2.51□□□□□ -2.01
TRIM3O75382 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM3O75382 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM3O75382 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.51□□□□□ -2.01
TRIM3O75382 RNU6-759P-201ENST00000516740 103 ntBASIC2.51□□□□□ -2.01
TRIM3O75382 RNA5SP290-201ENST00000517133 127 ntBASIC2.51□□□□□ -2.01
TRIM3O75382 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM3O75382 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM3O75382 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM3O75382 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.51□□□□□ -2.01
TRIM3O75382 AL161729.4-201ENST00000604650 476 ntBASIC2.51□□□□□ -2.01
TRIM3O75382 MTND4LP5-201ENST00000605152 292 ntBASIC2.51□□□□□ -2.01
TRIM3O75382 AC105129.3-201ENST00000605455 485 ntBASIC2.51□□□□□ -2.01
TRIM3O75382 AC009159.1-201ENST00000618386 642 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms