Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 MTND4P1-201ENST00000457501 1466 ntBASIC2.26□□□□□ -2.05
NPHP4O75161 AL356057.2-201ENST00000403318 432 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 AL356131.1-201ENST00000405826 414 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 RN7SKP101-201ENST00000411376 320 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.25□□□□□ -2.05
NPHP4O75161 MTCO1P3-201ENST00000429327 192 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NPHP4O75161 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.25□□□□□ -2.05
NPHP4O75161 AC009296.1-201ENST00000443146 155 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.25□□□□□ -2.05
NPHP4O75161 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.25□□□□□ -2.05
NPHP4O75161 AC026410.2-201ENST00000460281 156 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.25□□□□□ -2.05
NPHP4O75161 RNU1-92P-201ENST00000517017 135 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 AC087897.1-201ENST00000550134 156 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.25□□□□□ -2.05
NPHP4O75161 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.25□□□□□ -2.05
NPHP4O75161 MIR5694-201ENST00000581190 76 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.25□□□□□ -2.05
NPHP4O75161 U73023.1-201ENST00000603134 700 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.25□□□□□ -2.05
NPHP4O75161 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NPHP4O75161 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
NPHP4O75161 MAPK10-266ENST00000641066 6555 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
NPHP4O75161 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
NPHP4O75161 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
NPHP4O75161 DEFB108F-201ENST00000344638 222 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 RNU6-270P-201ENST00000364131 105 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 AL079342.2-201ENST00000403367 482 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 AL161449.1-201ENST00000414531 1199 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 BX510359.4-201ENST00000423750 193 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 AC013262.1-201ENST00000426710 252 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 AC234775.1-201ENST00000454247 670 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 SUMO2P2-201ENST00000456482 255 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.25□□□□□ -2.05
NPHP4O75161 RN7SL274P-201ENST00000492268 272 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.25□□□□□ -2.05
NPHP4O75161 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NPHP4O75161 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.25□□□□□ -2.05
NPHP4O75161 AL359273.1-201ENST00000510918 627 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 AC093677.1-201ENST00000514414 678 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 DEFB108D-201ENST00000527787 222 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 AC008015.1-201ENST00000555505 465 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.25□□□□□ -2.05
NPHP4O75161 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.25□□□□□ -2.05
NPHP4O75161 AC090888.1-201ENST00000561335 1141 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 MIR3935-201ENST00000583472 104 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 MTATP6P2-201ENST00000603319 678 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 AC004853.1-201ENST00000604902 698 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 AC084824.5-201ENST00000612009 413 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 DUXAP10-204ENST00000612052 616 ntBASIC2.25□□□□□ -2.05
NPHP4O75161 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.24□□□□□ -2.05
NPHP4O75161 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
NPHP4O75161 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NPHP4O75161 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
NPHP4O75161 Y_RNA.408-201ENST00000383987 102 ntBASIC2.24□□□□□ -2.05
NPHP4O75161 RNU6-198P-201ENST00000384258 104 ntBASIC2.24□□□□□ -2.05
NPHP4O75161 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.24□□□□□ -2.05
NPHP4O75161 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.24□□□□□ -2.05
NPHP4O75161 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.24□□□□□ -2.05
NPHP4O75161 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.24□□□□□ -2.05
NPHP4O75161 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.24□□□□□ -2.05
NPHP4O75161 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
NPHP4O75161 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.24□□□□□ -2.05
NPHP4O75161 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.24□□□□□ -2.05
NPHP4O75161 NDUFS5P6-201ENST00000529136 295 ntBASIC2.24□□□□□ -2.05
NPHP4O75161 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.24□□□□□ -2.05
NPHP4O75161 AL049838.1-201ENST00000563647 981 ntBASIC2.24□□□□□ -2.05
NPHP4O75161 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.24□□□□□ -2.05
NPHP4O75161 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.24□□□□□ -2.05
NPHP4O75161 MIR5194-201ENST00000582634 120 ntBASIC2.24□□□□□ -2.05
NPHP4O75161 AL161734.1-201ENST00000609720 557 ntBASIC2.24□□□□□ -2.05
NPHP4O75161 AC008759.3-201ENST00000613300 508 ntBASIC2.24□□□□□ -2.05
NPHP4O75161 AL161629.2-201ENST00000615347 275 ntBASIC2.24□□□□□ -2.05
NPHP4O75161 AC090132.2-201ENST00000615881 347 ntBASIC2.24□□□□□ -2.05
NPHP4O75161 AL353770.2-201ENST00000620024 78 ntBASIC2.24□□□□□ -2.05
NPHP4O75161 MIR1322-201ENST00000638013 71 ntBASIC2.24□□□□□ -2.05
NPHP4O75161 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
NPHP4O75161 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
NPHP4O75161 RNU6-216P-201ENST00000363282 104 ntBASIC2.23□□□□□ -2.05
NPHP4O75161 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
NPHP4O75161 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.23□□□□□ -2.05
NPHP4O75161 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.23□□□□□ -2.05
NPHP4O75161 AL513185.2-201ENST00000425543 193 ntBASIC2.23□□□□□ -2.05
NPHP4O75161 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.23□□□□□ -2.05
NPHP4O75161 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.23□□□□□ -2.05
NPHP4O75161 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.23□□□□□ -2.05
NPHP4O75161 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.23□□□□□ -2.05
NPHP4O75161 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.23□□□□□ -2.05
NPHP4O75161 AC092902.1-201ENST00000486999 259 ntBASIC2.23□□□□□ -2.05
NPHP4O75161 AC079203.1-201ENST00000487972 404 ntBASIC2.23□□□□□ -2.05
NPHP4O75161 AL049874.1-201ENST00000489560 388 ntBASIC2.23□□□□□ -2.05
NPHP4O75161 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.23□□□□□ -2.05
NPHP4O75161 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.23□□□□□ -2.05
NPHP4O75161 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.23□□□□□ -2.05
NPHP4O75161 SNORA31.24-201ENST00000517232 57 ntBASIC2.23□□□□□ -2.05
NPHP4O75161 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.23□□□□□ -2.05
NPHP4O75161 AC016957.1-201ENST00000534895 309 ntBASIC2.23□□□□□ -2.05
NPHP4O75161 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms