Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AL139156.1-201ENST00000412785 841 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 RPL21P38-201ENST00000418090 167 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 RPL23AP38-201ENST00000423801 469 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 AL138785.1-201ENST00000425821 331 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 AC093106.2-201ENST00000428212 385 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 EIF1P2-201ENST00000428233 350 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 AL645568.3-201ENST00000433683 316 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM13O60858 AC005094.1-201ENST00000440420 368 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM13O60858 AC053481.1-201ENST00000467217 306 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 RPL23AP55-201ENST00000498163 452 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM13O60858 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM13O60858 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM13O60858 IGKV2D-36-201ENST00000518643 226 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 IGKV1-32-201ENST00000519290 311 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 CYCSP27-201ENST00000527643 293 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 AP001781.1-201ENST00000530977 207 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 AP002770.2-201ENST00000543613 532 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM13O60858 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM13O60858 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM13O60858 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM13O60858 AL138889.2-201ENST00000603883 242 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 AL451044.1-201ENST00000604867 238 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 AC064801.1-201ENST00000612025 407 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
TRIM13O60858 MIR6886-201ENST00000619864 61 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM13O60858 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
TRIM13O60858 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
TRIM13O60858 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM13O60858 AC009951.1-201ENST00000623674 2614 ntBASIC4.25□□□□□ -1.73
TRIM13O60858 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM13O60858 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.24□□□□□ -1.73
TRIM13O60858 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
TRIM13O60858 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM13O60858 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM13O60858 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
TRIM13O60858 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM13O60858 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM13O60858 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TRIM13O60858 MIR335-201ENST00000362173 94 ntBASIC4.24□□□□□ -1.73
TRIM13O60858 SNORA51.1-201ENST00000363243 140 ntBASIC4.24□□□□□ -1.73
TRIM13O60858 RNY3P11-201ENST00000364153 102 ntBASIC4.24□□□□□ -1.73
TRIM13O60858 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM13O60858 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TRIM13O60858 RNU6-1081P-201ENST00000384537 107 ntBASIC4.24□□□□□ -1.73
TRIM13O60858 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TRIM13O60858 SNORA11.3-201ENST00000408471 128 ntBASIC4.24□□□□□ -1.73
TRIM13O60858 RNU2-33P-201ENST00000410344 192 ntBASIC4.24□□□□□ -1.73
TRIM13O60858 RNU6-1203P-201ENST00000410703 110 ntBASIC4.24□□□□□ -1.73
TRIM13O60858 RNU2-25P-201ENST00000411041 191 ntBASIC4.24□□□□□ -1.73
TRIM13O60858 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.24□□□□□ -1.73
TRIM13O60858 TPT1P13-201ENST00000449760 499 ntBASIC4.24□□□□□ -1.73
TRIM13O60858 RPL37P6-202ENST00000464216 403 ntBASIC4.24□□□□□ -1.73
TRIM13O60858 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM13O60858 AC006517.1-201ENST00000480485 328 ntBASIC4.24□□□□□ -1.73
TRIM13O60858 AC004453.1-201ENST00000487895 408 ntBASIC4.24□□□□□ -1.73
TRIM13O60858 RN7SL629P-201ENST00000489622 285 ntBASIC4.24□□□□□ -1.73
TRIM13O60858 AC104164.2-201ENST00000496953 495 ntBASIC4.24□□□□□ -1.73
TRIM13O60858 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM13O60858 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM13O60858 RN7SKP234-201ENST00000517173 224 ntBASIC4.24□□□□□ -1.73
TRIM13O60858 HMGN1P28-201ENST00000521340 364 ntBASIC4.24□□□□□ -1.73
TRIM13O60858 AL133271.1-201ENST00000538229 291 ntBASIC4.24□□□□□ -1.73
TRIM13O60858 AC025423.5-201ENST00000550230 219 ntBASIC4.24□□□□□ -1.73
TRIM13O60858 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.24□□□□□ -1.73
TRIM13O60858 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM13O60858 VN1R91P-201ENST00000594377 169 ntBASIC4.24□□□□□ -1.73
TRIM13O60858 AC006329.2-201ENST00000611491 394 ntBASIC4.24□□□□□ -1.73
TRIM13O60858 AL021997.2-201ENST00000615674 271 ntBASIC4.24□□□□□ -1.73
TRIM13O60858 AL359547.2-201ENST00000615810 418 ntBASIC4.24□□□□□ -1.73
TRIM13O60858 SNORA11.6-201ENST00000619030 128 ntBASIC4.24□□□□□ -1.73
TRIM13O60858 AP001784.1-201ENST00000624107 428 ntBASIC4.24□□□□□ -1.73
TRIM13O60858 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.24□□□□□ -1.73
TRIM13O60858 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM13O60858 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM13O60858 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
TRIM13O60858 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM13O60858 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM13O60858 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM13O60858 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM13O60858 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
TRIM13O60858 Y_RNA.200-201ENST00000364018 102 ntBASIC4.23□□□□□ -1.73
TRIM13O60858 RNU6-715P-201ENST00000365204 103 ntBASIC4.23□□□□□ -1.73
TRIM13O60858 MIR517A-201ENST00000385001 87 ntBASIC4.23□□□□□ -1.73
TRIM13O60858 RNU6-121P-201ENST00000410525 99 ntBASIC4.23□□□□□ -1.73
TRIM13O60858 BX276092.3-201ENST00000424182 230 ntBASIC4.23□□□□□ -1.73
TRIM13O60858 AL162591.2-201ENST00000449634 317 ntBASIC4.23□□□□□ -1.73
TRIM13O60858 AL031274.1-201ENST00000450334 232 ntBASIC4.23□□□□□ -1.73
TRIM13O60858 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM13O60858 RPL23AP31-201ENST00000456160 467 ntBASIC4.23□□□□□ -1.73
TRIM13O60858 snoU109.4-201ENST00000458953 143 ntBASIC4.23□□□□□ -1.73
TRIM13O60858 RNU7-187P-201ENST00000458985 68 ntBASIC4.23□□□□□ -1.73
TRIM13O60858 AC084198.1-201ENST00000477747 402 ntBASIC4.23□□□□□ -1.73
TRIM13O60858 AC025554.1-201ENST00000505641 188 ntBASIC4.23□□□□□ -1.73
TRIM13O60858 HIGD1AP3-201ENST00000515857 278 ntBASIC4.23□□□□□ -1.73
TRIM13O60858 RNU7-4P-201ENST00000516961 62 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms