Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.04□□□□□ -1.92
TO15178 MIR92B-201ENST00000607575 96 ntBASIC3.04□□□□□ -1.92
TO15178 AC084757.4-201ENST00000616350 526 ntBASIC3.04□□□□□ -1.92
TO15178 AC012314.7-201ENST00000619693 93 ntBASIC3.04□□□□□ -1.92
TO15178 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.04□□□□□ -1.92
TO15178 AC073476.4-201ENST00000628409 72 ntBASIC3.04□□□□□ -1.92
TO15178 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
TO15178 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.04□□□□□ -1.92
TO15178 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.03□□□□□ -1.92
TO15178 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
TO15178 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.03□□□□□ -1.92
TO15178 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TO15178 Y_RNA.22-201ENST00000362492 102 ntBASIC3.03□□□□□ -1.92
TO15178 RNU1-70P-201ENST00000362618 164 ntBASIC3.03□□□□□ -1.92
TO15178 RNU6-1167P-201ENST00000363227 94 ntBASIC3.03□□□□□ -1.92
TO15178 RNU6-14P-201ENST00000384630 106 ntBASIC3.03□□□□□ -1.92
TO15178 MIR34B-201ENST00000385076 84 ntBASIC3.03□□□□□ -1.92
TO15178 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.03□□□□□ -1.92
TO15178 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.03□□□□□ -1.92
TO15178 MTCO2P11-201ENST00000431069 680 ntBASIC3.03□□□□□ -1.92
TO15178 BNIP3P2-201ENST00000441221 577 ntBASIC3.03□□□□□ -1.92
TO15178 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.03□□□□□ -1.92
TO15178 MTCYBP1-201ENST00000454315 1119 ntBASIC3.03□□□□□ -1.92
TO15178 RN7SL601P-201ENST00000471221 293 ntBASIC3.03□□□□□ -1.92
TO15178 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.03□□□□□ -1.92
TO15178 AC126389.1-201ENST00000477436 290 ntBASIC3.03□□□□□ -1.92
TO15178 HMGB1P29-201ENST00000505659 499 ntBASIC3.03□□□□□ -1.92
TO15178 AC108078.1-201ENST00000508073 725 ntBASIC3.03□□□□□ -1.92
TO15178 RNU6-677P-201ENST00000516914 101 ntBASIC3.03□□□□□ -1.92
TO15178 RNU6-56P-201ENST00000516986 93 ntBASIC3.03□□□□□ -1.92
TO15178 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.03□□□□□ -1.92
TO15178 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.03□□□□□ -1.92
TO15178 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.03□□□□□ -1.92
TO15178 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.03□□□□□ -1.92
TO15178 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.03□□□□□ -1.92
TO15178 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.03□□□□□ -1.92
TO15178 HMGB1P6-201ENST00000569046 646 ntBASIC3.03□□□□□ -1.92
TO15178 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.03□□□□□ -1.92
TO15178 RPL23AP78-201ENST00000599928 470 ntBASIC3.03□□□□□ -1.92
TO15178 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.03□□□□□ -1.92
TO15178 AC107294.1-201ENST00000609524 467 ntBASIC3.03□□□□□ -1.92
TO15178 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TO15178 AC087241.4-201ENST00000612441 480 ntBASIC3.03□□□□□ -1.92
TO15178 AL157817.1-201ENST00000614264 790 ntBASIC3.03□□□□□ -1.92
TO15178 AC073534.2-201ENST00000620377 381 ntBASIC3.03□□□□□ -1.92
TO15178 AC009161.2-201ENST00000624626 138 ntBASIC3.03□□□□□ -1.92
TO15178 AC099654.7-201ENST00000635788 2127 ntBASIC3.03□□□□□ -1.92
TO15178 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TO15178 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TO15178 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.02□□□□□ -1.93
TO15178 UBE2L2-201ENST00000254302 429 ntBASIC3.02□□□□□ -1.93
TO15178 SNORA63.1-201ENST00000362493 131 ntBASIC3.02□□□□□ -1.93
TO15178 Y_RNA.245-201ENST00000364493 95 ntBASIC3.02□□□□□ -1.93
TO15178 RNU6-1103P-201ENST00000384150 107 ntBASIC3.02□□□□□ -1.93
TO15178 RPL5P18-201ENST00000406671 891 ntBASIC3.02□□□□□ -1.93
TO15178 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.02□□□□□ -1.93
TO15178 AC245291.1-201ENST00000419501 328 ntBASIC3.02□□□□□ -1.93
TO15178 AL158156.1-201ENST00000422509 473 ntBASIC3.02□□□□□ -1.93
TO15178 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.02□□□□□ -1.93
TO15178 AC005326.1-201ENST00000429197 123 ntBASIC3.02□□□□□ -1.93
TO15178 AC073464.1-201ENST00000429823 534 ntBASIC3.02□□□□□ -1.93
TO15178 HMGB3P11-201ENST00000440127 604 ntBASIC3.02□□□□□ -1.93
TO15178 MTND4P25-201ENST00000441039 533 ntBASIC3.02□□□□□ -1.93
TO15178 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.02□□□□□ -1.93
TO15178 Z99127.3-201ENST00000448158 395 ntBASIC3.02□□□□□ -1.93
TO15178 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.02□□□□□ -1.93
TO15178 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TO15178 ELOCP23-201ENST00000452014 332 ntBASIC3.02□□□□□ -1.93
TO15178 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.02□□□□□ -1.93
TO15178 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.02□□□□□ -1.93
TO15178 AC010099.1-201ENST00000455434 375 ntBASIC3.02□□□□□ -1.93
TO15178 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.02□□□□□ -1.93
TO15178 AL135752.1-201ENST00000479477 471 ntBASIC3.02□□□□□ -1.93
TO15178 AC107401.1-201ENST00000503426 685 ntBASIC3.02□□□□□ -1.93
TO15178 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.02□□□□□ -1.93
TO15178 RNA5SP290-201ENST00000517133 127 ntBASIC3.02□□□□□ -1.93
TO15178 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.02□□□□□ -1.93
TO15178 HIGD1AP1-201ENST00000550979 275 ntBASIC3.02□□□□□ -1.93
TO15178 SUB1P2-201ENST00000556401 297 ntBASIC3.02□□□□□ -1.93
TO15178 AC010653.1-201ENST00000571108 881 ntBASIC3.02□□□□□ -1.93
TO15178 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.02□□□□□ -1.93
TO15178 Z84480.1-201ENST00000605131 311 ntBASIC3.02□□□□□ -1.93
TO15178 AC069200.1-201ENST00000609511 323 ntBASIC3.02□□□□□ -1.93
TO15178 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
TO15178 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.02□□□□□ -1.93
TO15178 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.02□□□□□ -1.93
TO15178 OR5AK4P-201ENST00000635912 903 ntBASIC3.02□□□□□ -1.93
TO15178 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TO15178 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
TO15178 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
TO15178 MTND5P7-201ENST00000413558 1798 ntBASIC3.02□□□□□ -1.93
TO15178 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
TO15178 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
TO15178 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
TO15178 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
TO15178 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.01□□□□□ -1.93
TO15178 RNA5SP383-201ENST00000362934 120 ntBASIC3.01□□□□□ -1.93
TO15178 RNU6-288P-201ENST00000363690 104 ntBASIC3.01□□□□□ -1.93
TO15178 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TO15178 AL139397.2-201ENST00000404529 772 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms