Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.47□□□□□ -2.17
CHD1O14646 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.47□□□□□ -2.17
CHD1O14646 AL109918.3-201ENST00000603072 338 ntBASIC1.47□□□□□ -2.17
CHD1O14646 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC1.47□□□□□ -2.17
CHD1O14646 AL118508.4-201ENST00000624142 1176 ntBASIC1.47□□□□□ -2.17
CHD1O14646 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.47□□□□□ -2.17
CHD1O14646 AC008669.1-201ENST00000565823 2178 ntBASIC1.47□□□□□ -2.17
CHD1O14646 AL049737.1-201ENST00000413920 1403 ntBASIC1.47□□□□□ -2.17
CHD1O14646 RNU1-62P-201ENST00000362599 164 ntBASIC1.46□□□□□ -2.18
CHD1O14646 RNU1-105P-201ENST00000363470 161 ntBASIC1.46□□□□□ -2.18
CHD1O14646 SNORD65-201ENST00000391079 73 ntBASIC1.46□□□□□ -2.18
CHD1O14646 AC068050.1-201ENST00000394891 380 ntBASIC1.46□□□□□ -2.18
CHD1O14646 RNA5SP193-201ENST00000410353 107 ntBASIC1.46□□□□□ -2.18
CHD1O14646 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.46□□□□□ -2.18
CHD1O14646 AC093155.1-201ENST00000440164 826 ntBASIC1.46□□□□□ -2.18
CHD1O14646 RPL31P58-201ENST00000469001 379 ntBASIC1.46□□□□□ -2.18
CHD1O14646 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CHD1O14646 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.46□□□□□ -2.18
CHD1O14646 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.46□□□□□ -2.18
CHD1O14646 RNU6-1251P-201ENST00000364502 107 ntBASIC1.46□□□□□ -2.18
CHD1O14646 AL356432.1-201ENST00000405809 419 ntBASIC1.46□□□□□ -2.18
CHD1O14646 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.46□□□□□ -2.18
CHD1O14646 HMGB1P49-201ENST00000418882 569 ntBASIC1.46□□□□□ -2.18
CHD1O14646 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.46□□□□□ -2.18
CHD1O14646 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC1.46□□□□□ -2.18
CHD1O14646 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.46□□□□□ -2.18
CHD1O14646 AL645638.1-201ENST00000440519 361 ntBASIC1.46□□□□□ -2.18
CHD1O14646 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.46□□□□□ -2.18
CHD1O14646 SNRPGP6-201ENST00000451124 220 ntBASIC1.46□□□□□ -2.18
CHD1O14646 AC093752.1-206ENST00000511823 336 ntBASIC1.46□□□□□ -2.18
CHD1O14646 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.46□□□□□ -2.18
CHD1O14646 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.46□□□□□ -2.18
CHD1O14646 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.46□□□□□ -2.18
CHD1O14646 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CHD1O14646 RMST_5.1-201ENST00000618704 126 ntBASIC1.46□□□□□ -2.18
CHD1O14646 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
CHD1O14646 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
CHD1O14646 AC009541.1-201ENST00000438279 2662 ntBASIC1.45□□□□□ -2.18
CHD1O14646 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
CHD1O14646 FTH1P12-201ENST00000432137 551 ntBASIC1.45□□□□□ -2.18
CHD1O14646 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.45□□□□□ -2.18
CHD1O14646 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.45□□□□□ -2.18
CHD1O14646 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.45□□□□□ -2.18
CHD1O14646 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.45□□□□□ -2.18
CHD1O14646 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.45□□□□□ -2.18
CHD1O14646 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.45□□□□□ -2.18
CHD1O14646 AC012254.4-201ENST00000588843 273 ntBASIC1.45□□□□□ -2.18
CHD1O14646 SNORA68.1-201ENST00000364537 132 ntBASIC1.44□□□□□ -2.18
CHD1O14646 SNORA16B-201ENST00000364674 135 ntBASIC1.44□□□□□ -2.18
CHD1O14646 SFR1P1-201ENST00000403720 688 ntBASIC1.44□□□□□ -2.18
CHD1O14646 AL512604.1-201ENST00000404812 257 ntBASIC1.44□□□□□ -2.18
CHD1O14646 HMGB3P31-201ENST00000413333 595 ntBASIC1.44□□□□□ -2.18
CHD1O14646 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.44□□□□□ -2.18
CHD1O14646 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.44□□□□□ -2.18
CHD1O14646 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.44□□□□□ -2.18
CHD1O14646 DUXAP8-207ENST00000456786 622 ntBASIC1.44□□□□□ -2.18
CHD1O14646 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.44□□□□□ -2.18
CHD1O14646 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.44□□□□□ -2.18
CHD1O14646 RNU6-928P-201ENST00000516876 104 ntBASIC1.44□□□□□ -2.18
CHD1O14646 AP005597.4-201ENST00000526762 229 ntBASIC1.44□□□□□ -2.18
CHD1O14646 SNRPGP16-201ENST00000533275 226 ntBASIC1.44□□□□□ -2.18
CHD1O14646 MIR4711-201ENST00000578274 70 ntBASIC1.44□□□□□ -2.18
CHD1O14646 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.44□□□□□ -2.18
CHD1O14646 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.44□□□□□ -2.18
CHD1O14646 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.43□□□□□ -2.18
CHD1O14646 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.43□□□□□ -2.18
CHD1O14646 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.43□□□□□ -2.18
CHD1O14646 OR6K5P-201ENST00000447050 945 ntBASIC1.43□□□□□ -2.18
CHD1O14646 AL500527.1-201ENST00000448532 255 ntBASIC1.43□□□□□ -2.18
CHD1O14646 AC096745.1-201ENST00000509945 370 ntBASIC1.43□□□□□ -2.18
CHD1O14646 AP004247.1-201ENST00000531556 1289 ntBASIC1.43□□□□□ -2.18
CHD1O14646 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.43□□□□□ -2.18
CHD1O14646 AC092474.3-201ENST00000603022 568 ntBASIC1.43□□□□□ -2.18
CHD1O14646 HSPE1P7-201ENST00000604681 321 ntBASIC1.43□□□□□ -2.18
CHD1O14646 AC025594.3-201ENST00000613068 790 ntBASIC1.43□□□□□ -2.18
CHD1O14646 MIR1197-201ENST00000408818 88 ntBASIC1.43□□□□□ -2.18
CHD1O14646 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.43□□□□□ -2.18
CHD1O14646 RPL27AP8-201ENST00000424277 446 ntBASIC1.43□□□□□ -2.18
CHD1O14646 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.43□□□□□ -2.18
CHD1O14646 RPS29P23-201ENST00000458635 123 ntBASIC1.43□□□□□ -2.18
CHD1O14646 AL121769.1-201ENST00000469473 401 ntBASIC1.43□□□□□ -2.18
CHD1O14646 EIF4EP3-201ENST00000498782 656 ntBASIC1.43□□□□□ -2.18
CHD1O14646 AP003072.2-201ENST00000527756 676 ntBASIC1.43□□□□□ -2.18
CHD1O14646 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.43□□□□□ -2.18
CHD1O14646 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.43□□□□□ -2.18
CHD1O14646 GAS5-AS1-201ENST00000602767 694 ntBASIC1.43□□□□□ -2.18
CHD1O14646 DUXAP11-201ENST00000603858 526 ntBASIC1.43□□□□□ -2.18
CHD1O14646 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
CHD1O14646 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.42□□□□□ -2.18
CHD1O14646 AL365496.1-201ENST00000426885 215 ntBASIC1.42□□□□□ -2.18
CHD1O14646 AP000949.1-201ENST00000438328 629 ntBASIC1.42□□□□□ -2.18
CHD1O14646 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
CHD1O14646 AC010099.1-201ENST00000455434 375 ntBASIC1.42□□□□□ -2.18
CHD1O14646 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.42□□□□□ -2.18
CHD1O14646 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.42□□□□□ -2.18
CHD1O14646 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.42□□□□□ -2.18
CHD1O14646 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.42□□□□□ -2.18
CHD1O14646 MIR5571-201ENST00000577998 113 ntBASIC1.42□□□□□ -2.18
CHD1O14646 UCA1.1-201ENST00000620952 75 ntBASIC1.42□□□□□ -2.18
CHD1O14646 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms