Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 GDI2P2-201ENST00000445131 608 ntBASIC2.61□□□□□ -1.99
CDX4O14627 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.61□□□□□ -1.99
CDX4O14627 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.61□□□□□ -1.99
CDX4O14627 ARL2BPP4-201ENST00000506854 471 ntBASIC2.61□□□□□ -1.99
CDX4O14627 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.61□□□□□ -1.99
CDX4O14627 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.61□□□□□ -1.99
CDX4O14627 AC116347.2-201ENST00000514912 523 ntBASIC2.61□□□□□ -1.99
CDX4O14627 RNU6-798P-201ENST00000516912 103 ntBASIC2.61□□□□□ -1.99
CDX4O14627 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.61□□□□□ -1.99
CDX4O14627 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.61□□□□□ -1.99
CDX4O14627 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.61□□□□□ -1.99
CDX4O14627 ZNF861P-201ENST00000588126 639 ntBASIC2.61□□□□□ -1.99
CDX4O14627 AC083760.1-201ENST00000589621 670 ntBASIC2.61□□□□□ -1.99
CDX4O14627 AC087683.1-201ENST00000591187 441 ntBASIC2.61□□□□□ -1.99
CDX4O14627 AC073648.5-201ENST00000603502 305 ntBASIC2.61□□□□□ -1.99
CDX4O14627 Z99129.1-201ENST00000612510 255 ntBASIC2.61□□□□□ -1.99
CDX4O14627 AL603758.1-201ENST00000618654 241 ntBASIC2.61□□□□□ -1.99
CDX4O14627 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CDX4O14627 AC019226.1-201ENST00000625666 515 ntBASIC2.61□□□□□ -1.99
CDX4O14627 AC093591.3-201ENST00000634516 308 ntBASIC2.61□□□□□ -1.99
CDX4O14627 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.61□□□□□ -1.99
CDX4O14627 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.61□□□□□ -1.99
CDX4O14627 CCT4P2-201ENST00000233836 1548 ntBASIC2.61□□□□□ -1.99
CDX4O14627 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.61□□□□□ -1.99
CDX4O14627 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.61□□□□□ -1.99
CDX4O14627 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.61□□□□□ -1.99
CDX4O14627 AC008568.2-201ENST00000623862 2313 ntBASIC2.6□□□□□ -1.99
CDX4O14627 TEX21P-201ENST00000447107 1476 ntBASIC2.6□□□□□ -1.99
CDX4O14627 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CDX4O14627 RNA5SP383-201ENST00000362934 120 ntBASIC2.6□□□□□ -1.99
CDX4O14627 RNU4-91P-201ENST00000364778 135 ntBASIC2.6□□□□□ -1.99
CDX4O14627 RNU6-348P-201ENST00000384386 107 ntBASIC2.6□□□□□ -1.99
CDX4O14627 Y_RNA.548-201ENST00000384656 105 ntBASIC2.6□□□□□ -1.99
CDX4O14627 MIR764-201ENST00000390811 85 ntBASIC2.6□□□□□ -1.99
CDX4O14627 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
CDX4O14627 RNA5SP425-201ENST00000410336 112 ntBASIC2.6□□□□□ -1.99
CDX4O14627 RNU2-16P-201ENST00000410712 136 ntBASIC2.6□□□□□ -1.99
CDX4O14627 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.6□□□□□ -1.99
CDX4O14627 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.6□□□□□ -1.99
CDX4O14627 AF274854.1-201ENST00000413236 615 ntBASIC2.6□□□□□ -1.99
CDX4O14627 RPL17P12-201ENST00000413391 526 ntBASIC2.6□□□□□ -1.99
CDX4O14627 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.6□□□□□ -1.99
CDX4O14627 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.6□□□□□ -1.99
CDX4O14627 AC245291.1-201ENST00000419501 328 ntBASIC2.6□□□□□ -1.99
CDX4O14627 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.6□□□□□ -1.99
CDX4O14627 AL603825.1-201ENST00000438481 80 ntBASIC2.6□□□□□ -1.99
CDX4O14627 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.6□□□□□ -1.99
CDX4O14627 AL031667.1-201ENST00000440222 725 ntBASIC2.6□□□□□ -1.99
CDX4O14627 RPL26P6-201ENST00000440913 438 ntBASIC2.6□□□□□ -1.99
CDX4O14627 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.6□□□□□ -1.99
CDX4O14627 IFNA11P-201ENST00000446352 526 ntBASIC2.6□□□□□ -1.99
CDX4O14627 SSXP1-201ENST00000453640 473 ntBASIC2.6□□□□□ -1.99
CDX4O14627 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.6□□□□□ -1.99
CDX4O14627 AL049714.1-201ENST00000466686 347 ntBASIC2.6□□□□□ -1.99
CDX4O14627 AC092185.1-201ENST00000491371 97 ntBASIC2.6□□□□□ -1.99
CDX4O14627 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.6□□□□□ -1.99
CDX4O14627 RNA5SP282-201ENST00000516355 108 ntBASIC2.6□□□□□ -1.99
CDX4O14627 RNU6-840P-201ENST00000517275 65 ntBASIC2.6□□□□□ -1.99
CDX4O14627 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.6□□□□□ -1.99
CDX4O14627 MIR4648-201ENST00000580107 72 ntBASIC2.6□□□□□ -1.99
CDX4O14627 AL021997.1-201ENST00000605757 193 ntBASIC2.6□□□□□ -1.99
CDX4O14627 AC093838.1-201ENST00000613014 469 ntBASIC2.6□□□□□ -1.99
CDX4O14627 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.6□□□□□ -1.99
CDX4O14627 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.6□□□□□ -1.99
CDX4O14627 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CDX4O14627 AC092435.3-201ENST00000565538 3654 ntBASIC2.6□□□□□ -1.99
CDX4O14627 MAPK10-362ENST00000641864 4484 ntBASIC2.6□□□□□ -1.99
CDX4O14627 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CDX4O14627 MTND5P33-201ENST00000571250 1450 ntBASIC2.59□□□□□ -1.99
CDX4O14627 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CDX4O14627 CUL1P1-201ENST00000509510 2425 ntBASIC2.59□□□□□ -1.99
CDX4O14627 MTND5P29-201ENST00000458676 1807 ntBASIC2.59□□□□□ -1.99
CDX4O14627 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.59□□□□□ -1.99
CDX4O14627 Y_RNA.3-201ENST00000362331 103 ntBASIC2.59□□□□□ -1.99
CDX4O14627 Y_RNA.41-201ENST00000362646 102 ntBASIC2.59□□□□□ -1.99
CDX4O14627 RNU5E-8P-201ENST00000363502 116 ntBASIC2.59□□□□□ -1.99
CDX4O14627 U3.11-201ENST00000364476 212 ntBASIC2.59□□□□□ -1.99
CDX4O14627 RNU5E-5P-201ENST00000365379 116 ntBASIC2.59□□□□□ -1.99
CDX4O14627 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CDX4O14627 FAT1P1-201ENST00000406588 507 ntBASIC2.59□□□□□ -1.99
CDX4O14627 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.59□□□□□ -1.99
CDX4O14627 TMEM167AP1-201ENST00000423409 219 ntBASIC2.59□□□□□ -1.99
CDX4O14627 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.59□□□□□ -1.99
CDX4O14627 TRIAP1P1-201ENST00000427062 225 ntBASIC2.59□□□□□ -1.99
CDX4O14627 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.59□□□□□ -1.99
CDX4O14627 HMGB1P18-201ENST00000438801 619 ntBASIC2.59□□□□□ -1.99
CDX4O14627 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.59□□□□□ -1.99
CDX4O14627 MTND2P24-201ENST00000453434 806 ntBASIC2.59□□□□□ -1.99
CDX4O14627 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.59□□□□□ -1.99
CDX4O14627 RNU7-59P-201ENST00000459101 61 ntBASIC2.59□□□□□ -1.99
CDX4O14627 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
CDX4O14627 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.59□□□□□ -1.99
CDX4O14627 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CDX4O14627 FABP5P5-201ENST00000515537 406 ntBASIC2.59□□□□□ -1.99
CDX4O14627 SNORA70.16-201ENST00000516390 95 ntBASIC2.59□□□□□ -1.99
CDX4O14627 RNU6-405P-201ENST00000516637 110 ntBASIC2.59□□□□□ -1.99
CDX4O14627 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.59□□□□□ -1.99
CDX4O14627 AP000907.2-201ENST00000530827 353 ntBASIC2.59□□□□□ -1.99
CDX4O14627 AL133271.1-201ENST00000538229 291 ntBASIC2.59□□□□□ -1.99
CDX4O14627 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms