Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 HMGN2P30-201ENST00000423237 256 ntBASIC3.03□□□□□ -1.92
O00370 AL356867.1-201ENST00000429623 299 ntBASIC3.03□□□□□ -1.92
O00370 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.03□□□□□ -1.92
O00370 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.03□□□□□ -1.92
O00370 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.03□□□□□ -1.92
O00370 Z96811.1-201ENST00000445880 108 ntBASIC3.03□□□□□ -1.92
O00370 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.03□□□□□ -1.92
O00370 AP001486.1-201ENST00000463339 476 ntBASIC3.03□□□□□ -1.92
O00370 AC010631.1-201ENST00000474150 156 ntBASIC3.03□□□□□ -1.92
O00370 RPS27AP9-201ENST00000477681 438 ntBASIC3.03□□□□□ -1.92
O00370 AL049873.1-201ENST00000480540 376 ntBASIC3.03□□□□□ -1.92
O00370 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.03□□□□□ -1.92
O00370 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.03□□□□□ -1.92
O00370 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.03□□□□□ -1.92
O00370 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.03□□□□□ -1.92
O00370 MIR3118-1-201ENST00000581787 76 ntBASIC3.03□□□□□ -1.92
O00370 AC005771.1-201ENST00000585581 349 ntBASIC3.03□□□□□ -1.92
O00370 AC008739.2-201ENST00000597006 317 ntBASIC3.03□□□□□ -1.92
O00370 AC078899.3-201ENST00000599065 212 ntBASIC3.03□□□□□ -1.92
O00370 RPL23AP78-201ENST00000599928 470 ntBASIC3.03□□□□□ -1.92
O00370 AC024153.1-201ENST00000603103 365 ntBASIC3.03□□□□□ -1.92
O00370 DPPA3P3-201ENST00000603842 430 ntBASIC3.03□□□□□ -1.92
O00370 SDR42E1P2-201ENST00000614861 481 ntBASIC3.03□□□□□ -1.92
O00370 AC010338.1-201ENST00000621823 717 ntBASIC3.03□□□□□ -1.92
O00370 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.03□□□□□ -1.92
O00370 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
O00370 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.02□□□□□ -1.93
O00370 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.02□□□□□ -1.93
O00370 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.02□□□□□ -1.93
O00370 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.02□□□□□ -1.93
O00370 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.02□□□□□ -1.93
O00370 RNU5E-1-201ENST00000362477 120 ntBASIC3.02□□□□□ -1.93
O00370 RNU4-91P-201ENST00000364778 135 ntBASIC3.02□□□□□ -1.93
O00370 Y_RNA.436-201ENST00000384097 102 ntBASIC3.02□□□□□ -1.93
O00370 SNORA36C-201ENST00000384289 132 ntBASIC3.02□□□□□ -1.93
O00370 MIR512-1-201ENST00000384913 84 ntBASIC3.02□□□□□ -1.93
O00370 SNORD115.1-201ENST00000391109 76 ntBASIC3.02□□□□□ -1.93
O00370 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
O00370 AC127391.1-201ENST00000411737 98 ntBASIC3.02□□□□□ -1.93
O00370 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.02□□□□□ -1.93
O00370 BTF3L4P3-201ENST00000418879 476 ntBASIC3.02□□□□□ -1.93
O00370 AC006366.1-201ENST00000422002 759 ntBASIC3.02□□□□□ -1.93
O00370 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.02□□□□□ -1.93
O00370 AC005094.1-201ENST00000440420 368 ntBASIC3.02□□□□□ -1.93
O00370 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.02□□□□□ -1.93
O00370 MTND6P13-201ENST00000443510 523 ntBASIC3.02□□□□□ -1.93
O00370 AC009237.8-201ENST00000445492 379 ntBASIC3.02□□□□□ -1.93
O00370 UBBP3-201ENST00000445497 241 ntBASIC3.02□□□□□ -1.93
O00370 KLF3P2-201ENST00000465138 268 ntBASIC3.02□□□□□ -1.93
O00370 RPL9P33-201ENST00000484311 566 ntBASIC3.02□□□□□ -1.93
O00370 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.02□□□□□ -1.93
O00370 SNORA31.21-201ENST00000517180 77 ntBASIC3.02□□□□□ -1.93
O00370 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.02□□□□□ -1.93
O00370 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.02□□□□□ -1.93
O00370 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.02□□□□□ -1.93
O00370 AC002545.1-201ENST00000592511 181 ntBASIC3.02□□□□□ -1.93
O00370 AC020895.1-201ENST00000595362 272 ntBASIC3.02□□□□□ -1.93
O00370 AL451007.1-201ENST00000595491 289 ntBASIC3.02□□□□□ -1.93
O00370 AC087752.4-201ENST00000605911 462 ntBASIC3.02□□□□□ -1.93
O00370 AC090115.4-201ENST00000609970 188 ntBASIC3.02□□□□□ -1.93
O00370 AL133173.2-201ENST00000614270 90 ntBASIC3.02□□□□□ -1.93
O00370 AC002064.3-201ENST00000623448 346 ntBASIC3.02□□□□□ -1.93
O00370 AC073308.1-201ENST00000623696 305 ntBASIC3.02□□□□□ -1.93
O00370 OR5H6-203ENST00000642105 978 ntBASIC3.02□□□□□ -1.93
O00370 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.02□□□□□ -1.93
O00370 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.02□□□□□ -1.93
O00370 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
O00370 AC099654.7-201ENST00000635788 2127 ntBASIC3.02□□□□□ -1.93
O00370 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
O00370 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.01□□□□□ -1.93
O00370 SNORA18.3-201ENST00000384122 132 ntBASIC3.01□□□□□ -1.93
O00370 MIR325-201ENST00000385260 98 ntBASIC3.01□□□□□ -1.93
O00370 RNA5SP354-201ENST00000391247 136 ntBASIC3.01□□□□□ -1.93
O00370 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.01□□□□□ -1.93
O00370 SNORA11.2-201ENST00000408318 127 ntBASIC3.01□□□□□ -1.93
O00370 AC007919.1-201ENST00000429380 217 ntBASIC3.01□□□□□ -1.93
O00370 AC073614.1-201ENST00000438690 650 ntBASIC3.01□□□□□ -1.93
O00370 AL135938.1-201ENST00000443141 297 ntBASIC3.01□□□□□ -1.93
O00370 AC244505.5-201ENST00000443639 207 ntBASIC3.01□□□□□ -1.93
O00370 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.01□□□□□ -1.93
O00370 RN7SL297P-201ENST00000483161 293 ntBASIC3.01□□□□□ -1.93
O00370 HIGD1AP13-201ENST00000509878 289 ntBASIC3.01□□□□□ -1.93
O00370 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.01□□□□□ -1.93
O00370 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.01□□□□□ -1.93
O00370 RNA5SP337-201ENST00000517007 109 ntBASIC3.01□□□□□ -1.93
O00370 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.01□□□□□ -1.93
O00370 CYCSP39-201ENST00000565821 309 ntBASIC3.01□□□□□ -1.93
O00370 MIR3913-1-201ENST00000577744 102 ntBASIC3.01□□□□□ -1.93
O00370 AL137843.1-201ENST00000605078 385 ntBASIC3.01□□□□□ -1.93
O00370 AC103591.3-201ENST00000608684 209 ntBASIC3.01□□□□□ -1.93
O00370 AL161734.1-201ENST00000609720 557 ntBASIC3.01□□□□□ -1.93
O00370 AC004696.1-201ENST00000614345 607 ntBASIC3.01□□□□□ -1.93
O00370 AP001506.1-201ENST00000615444 211 ntBASIC3.01□□□□□ -1.93
O00370 MIR4275-201ENST00000636486 87 ntBASIC3.01□□□□□ -1.93
O00370 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
O00370 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.01□□□□□ -1.93
O00370 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3□□□□□ -1.93
O00370 Y_RNA.318-201ENST00000365131 97 ntBASIC3□□□□□ -1.93
O00370 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3□□□□□ -1.93
O00370 RNU2-62P-201ENST00000410868 191 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms