Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 POLR3GP2-201ENST00000588366 668 ntBASIC4.16□□□□□ -1.74
CBX4O00257 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.16□□□□□ -1.74
CBX4O00257 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.16□□□□□ -1.74
CBX4O00257 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.16□□□□□ -1.74
CBX4O00257 AC126177.8-201ENST00000618339 1015 ntBASIC4.16□□□□□ -1.74
CBX4O00257 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CBX4O00257 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CBX4O00257 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
CBX4O00257 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CBX4O00257 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.16□□□□□ -1.74
CBX4O00257 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CBX4O00257 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
CBX4O00257 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.15□□□□□ -1.74
CBX4O00257 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CBX4O00257 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.15□□□□□ -1.74
CBX4O00257 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
CBX4O00257 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
CBX4O00257 Y_RNA.33-201ENST00000362591 102 ntBASIC4.15□□□□□ -1.75
CBX4O00257 RNU6-266P-201ENST00000364225 107 ntBASIC4.15□□□□□ -1.75
CBX4O00257 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.15□□□□□ -1.75
CBX4O00257 Y_RNA.259-201ENST00000364619 101 ntBASIC4.15□□□□□ -1.75
CBX4O00257 Y_RNA.315-201ENST00000365117 102 ntBASIC4.15□□□□□ -1.75
CBX4O00257 Y_RNA.339-201ENST00000365325 102 ntBASIC4.15□□□□□ -1.75
CBX4O00257 Y_RNA.419-201ENST00000384041 102 ntBASIC4.15□□□□□ -1.75
CBX4O00257 PTMAP2-201ENST00000397627 327 ntBASIC4.15□□□□□ -1.75
CBX4O00257 MIR1302-11-201ENST00000408051 138 ntBASIC4.15□□□□□ -1.75
CBX4O00257 MIR1302-9-201ENST00000408365 138 ntBASIC4.15□□□□□ -1.75
CBX4O00257 MIR1302-10-201ENST00000408734 138 ntBASIC4.15□□□□□ -1.75
CBX4O00257 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CBX4O00257 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.15□□□□□ -1.75
CBX4O00257 AL360271.2-201ENST00000447710 161 ntBASIC4.15□□□□□ -1.75
CBX4O00257 FGF7P3-201ENST00000454645 303 ntBASIC4.15□□□□□ -1.75
CBX4O00257 SNORD19B-201ENST00000459623 84 ntBASIC4.15□□□□□ -1.75
CBX4O00257 RN7SL585P-201ENST00000470538 280 ntBASIC4.15□□□□□ -1.75
CBX4O00257 AC117503.1-201ENST00000472241 394 ntBASIC4.15□□□□□ -1.75
CBX4O00257 AC006517.1-201ENST00000480485 328 ntBASIC4.15□□□□□ -1.75
CBX4O00257 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.15□□□□□ -1.75
CBX4O00257 AC008716.1-201ENST00000511084 513 ntBASIC4.15□□□□□ -1.75
CBX4O00257 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.15□□□□□ -1.75
CBX4O00257 RN7SKP24-201ENST00000515888 284 ntBASIC4.15□□□□□ -1.75
CBX4O00257 AC087854.1-201ENST00000519706 414 ntBASIC4.15□□□□□ -1.75
CBX4O00257 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.15□□□□□ -1.75
CBX4O00257 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.15□□□□□ -1.75
CBX4O00257 AL442663.2-201ENST00000554385 511 ntBASIC4.15□□□□□ -1.75
CBX4O00257 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.15□□□□□ -1.75
CBX4O00257 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.15□□□□□ -1.75
CBX4O00257 AC073539.2-201ENST00000597113 165 ntBASIC4.15□□□□□ -1.75
CBX4O00257 AL133255.1-201ENST00000606374 441 ntBASIC4.15□□□□□ -1.75
CBX4O00257 MIR1302-2-201ENST00000607096 138 ntBASIC4.15□□□□□ -1.75
CBX4O00257 AL138726.1-201ENST00000614873 333 ntBASIC4.15□□□□□ -1.75
CBX4O00257 AC039056.2-201ENST00000622261 511 ntBASIC4.15□□□□□ -1.75
CBX4O00257 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.15□□□□□ -1.75
CBX4O00257 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CBX4O00257 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CBX4O00257 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.15□□□□□ -1.75
CBX4O00257 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
CBX4O00257 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.14□□□□□ -1.75
CBX4O00257 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CBX4O00257 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.14□□□□□ -1.75
CBX4O00257 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CBX4O00257 FRG1CP-201ENST00000358464 769 ntBASIC4.14□□□□□ -1.75
CBX4O00257 RNU6-562P-201ENST00000362731 107 ntBASIC4.14□□□□□ -1.75
CBX4O00257 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.14□□□□□ -1.75
CBX4O00257 RNU6-1179P-201ENST00000384667 107 ntBASIC4.14□□□□□ -1.75
CBX4O00257 RN7SKP158-201ENST00000410453 326 ntBASIC4.14□□□□□ -1.75
CBX4O00257 AC004552.1-201ENST00000419089 348 ntBASIC4.14□□□□□ -1.75
CBX4O00257 AL158156.1-201ENST00000422509 473 ntBASIC4.14□□□□□ -1.75
CBX4O00257 AL691449.1-201ENST00000426570 421 ntBASIC4.14□□□□□ -1.75
CBX4O00257 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.14□□□□□ -1.75
CBX4O00257 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.14□□□□□ -1.75
CBX4O00257 RPS3AP52-201ENST00000435639 297 ntBASIC4.14□□□□□ -1.75
CBX4O00257 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CBX4O00257 RPS24P13-201ENST00000442520 397 ntBASIC4.14□□□□□ -1.75
CBX4O00257 RPL32P28-201ENST00000443577 397 ntBASIC4.14□□□□□ -1.75
CBX4O00257 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.14□□□□□ -1.75
CBX4O00257 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.14□□□□□ -1.75
CBX4O00257 FABP5P15-201ENST00000453566 214 ntBASIC4.14□□□□□ -1.75
CBX4O00257 RPS26P3-201ENST00000470205 348 ntBASIC4.14□□□□□ -1.75
CBX4O00257 KC877373.1-201ENST00000479066 408 ntBASIC4.14□□□□□ -1.75
CBX4O00257 AC090543.2-201ENST00000483963 348 ntBASIC4.14□□□□□ -1.75
CBX4O00257 AC004057.1-201ENST00000485827 348 ntBASIC4.14□□□□□ -1.75
CBX4O00257 RPS27P27-201ENST00000498779 255 ntBASIC4.14□□□□□ -1.75
CBX4O00257 MTND5P5-201ENST00000503764 376 ntBASIC4.14□□□□□ -1.75
CBX4O00257 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CBX4O00257 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.14□□□□□ -1.75
CBX4O00257 AC008526.1-201ENST00000509149 338 ntBASIC4.14□□□□□ -1.75
CBX4O00257 RNA5SP154-201ENST00000516193 111 ntBASIC4.14□□□□□ -1.75
CBX4O00257 RNU6-1153P-201ENST00000516760 105 ntBASIC4.14□□□□□ -1.75
CBX4O00257 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.14□□□□□ -1.75
CBX4O00257 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.14□□□□□ -1.75
CBX4O00257 AP005639.2-201ENST00000527592 928 ntBASIC4.14□□□□□ -1.75
CBX4O00257 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.14□□□□□ -1.75
CBX4O00257 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.14□□□□□ -1.75
CBX4O00257 TRAV28-201ENST00000557548 323 ntBASIC4.14□□□□□ -1.75
CBX4O00257 MIR3690-201ENST00000580266 75 ntBASIC4.14□□□□□ -1.75
CBX4O00257 AC008638.3-201ENST00000603341 463 ntBASIC4.14□□□□□ -1.75
CBX4O00257 AC002044.1-201ENST00000606707 158 ntBASIC4.14□□□□□ -1.75
CBX4O00257 MIR6868-201ENST00000611215 58 ntBASIC4.14□□□□□ -1.75
CBX4O00257 FAM157A-202ENST00000615155 405 ntBASIC4.14□□□□□ -1.75
CBX4O00257 SNORD39.4-201ENST00000620099 78 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms