Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 AC244098.2-201ENST00000422068 99 ntBASIC5.4□□□□□ -1.54
USP17L3A6NCW0 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.4□□□□□ -1.54
USP17L3A6NCW0 AC092423.1-201ENST00000430165 186 ntBASIC5.4□□□□□ -1.54
USP17L3A6NCW0 AC090602.1-201ENST00000469695 252 ntBASIC5.4□□□□□ -1.54
USP17L3A6NCW0 HSPE1P20-201ENST00000538133 289 ntBASIC5.4□□□□□ -1.54
USP17L3A6NCW0 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
USP17L3A6NCW0 MIR3921-201ENST00000577308 85 ntBASIC5.4□□□□□ -1.54
USP17L3A6NCW0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.4□□□□□ -1.54
USP17L3A6NCW0 RPS29P30-201ENST00000600975 111 ntBASIC5.4□□□□□ -1.54
USP17L3A6NCW0 RNU6-6P-201ENST00000606623 107 ntBASIC5.4□□□□□ -1.54
USP17L3A6NCW0 MIR6891-201ENST00000618788 93 ntBASIC5.4□□□□□ -1.54
USP17L3A6NCW0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.4□□□□□ -1.54
USP17L3A6NCW0 AC008785.1-201ENST00000624475 456 ntBASIC5.4□□□□□ -1.54
USP17L3A6NCW0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
USP17L3A6NCW0 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
USP17L3A6NCW0 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
USP17L3A6NCW0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
USP17L3A6NCW0 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.4□□□□□ -1.55
USP17L3A6NCW0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
USP17L3A6NCW0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
USP17L3A6NCW0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP17L3A6NCW0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP17L3A6NCW0 AC116096.1-201ENST00000566804 2314 ntBASIC5.39□□□□□ -1.55
USP17L3A6NCW0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP17L3A6NCW0 SPRR2C-201ENST00000290702 219 ntBASIC5.39□□□□□ -1.55
USP17L3A6NCW0 Y_RNA.214-201ENST00000364201 112 ntBASIC5.39□□□□□ -1.55
USP17L3A6NCW0 RNU4-70P-201ENST00000384579 139 ntBASIC5.39□□□□□ -1.55
USP17L3A6NCW0 MIR3065-201ENST00000390137 79 ntBASIC5.39□□□□□ -1.55
USP17L3A6NCW0 AC091390.3-201ENST00000426478 338 ntBASIC5.39□□□□□ -1.55
USP17L3A6NCW0 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.39□□□□□ -1.55
USP17L3A6NCW0 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP17L3A6NCW0 NDUFB1P2-201ENST00000449477 176 ntBASIC5.39□□□□□ -1.55
USP17L3A6NCW0 SNORD127-201ENST00000458892 86 ntBASIC5.39□□□□□ -1.55
USP17L3A6NCW0 AC020593.1-201ENST00000507399 299 ntBASIC5.39□□□□□ -1.55
USP17L3A6NCW0 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
USP17L3A6NCW0 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP17L3A6NCW0 RNU6-911P-201ENST00000516523 104 ntBASIC5.39□□□□□ -1.55
USP17L3A6NCW0 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.39□□□□□ -1.55
USP17L3A6NCW0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.39□□□□□ -1.55
USP17L3A6NCW0 SNX18P1Y-201ENST00000616231 511 ntBASIC5.39□□□□□ -1.55
USP17L3A6NCW0 AL360181.4-201ENST00000621752 134 ntBASIC5.39□□□□□ -1.55
USP17L3A6NCW0 AC138627.2-201ENST00000624202 601 ntBASIC5.39□□□□□ -1.55
USP17L3A6NCW0 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.39□□□□□ -1.55
USP17L3A6NCW0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.39□□□□□ -1.55
USP17L3A6NCW0 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
USP17L3A6NCW0 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP17L3A6NCW0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
USP17L3A6NCW0 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP17L3A6NCW0 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.38□□□□□ -1.55
USP17L3A6NCW0 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP17L3A6NCW0 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.38□□□□□ -1.55
USP17L3A6NCW0 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
USP17L3A6NCW0 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
USP17L3A6NCW0 MTND5P9-201ENST00000503854 1755 ntBASIC5.38□□□□□ -1.55
USP17L3A6NCW0 AC010615.1-201ENST00000594254 1764 ntBASIC5.38□□□□□ -1.55
USP17L3A6NCW0 RNU6-335P-201ENST00000364563 113 ntBASIC5.38□□□□□ -1.55
USP17L3A6NCW0 RNU6-384P-201ENST00000364900 104 ntBASIC5.38□□□□□ -1.55
USP17L3A6NCW0 RNU6-629P-201ENST00000384061 103 ntBASIC5.38□□□□□ -1.55
USP17L3A6NCW0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
USP17L3A6NCW0 MIR1290-201ENST00000408735 78 ntBASIC5.38□□□□□ -1.55
USP17L3A6NCW0 SNORD56-201ENST00000413522 71 ntBASIC5.38□□□□□ -1.55
USP17L3A6NCW0 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.38□□□□□ -1.55
USP17L3A6NCW0 ELOCP20-201ENST00000422460 345 ntBASIC5.38□□□□□ -1.55
USP17L3A6NCW0 AL356867.1-201ENST00000429623 299 ntBASIC5.38□□□□□ -1.55
USP17L3A6NCW0 AC087650.1-201ENST00000431445 468 ntBASIC5.38□□□□□ -1.55
USP17L3A6NCW0 AL132765.1-201ENST00000434165 553 ntBASIC5.38□□□□□ -1.55
USP17L3A6NCW0 FCF1P4-201ENST00000448326 183 ntBASIC5.38□□□□□ -1.55
USP17L3A6NCW0 SNORA84-201ENST00000459229 133 ntBASIC5.38□□□□□ -1.55
USP17L3A6NCW0 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.38□□□□□ -1.55
USP17L3A6NCW0 AL160314.1-201ENST00000490836 438 ntBASIC5.38□□□□□ -1.55
USP17L3A6NCW0 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.38□□□□□ -1.55
USP17L3A6NCW0 AL359273.1-201ENST00000510918 627 ntBASIC5.38□□□□□ -1.55
USP17L3A6NCW0 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.38□□□□□ -1.55
USP17L3A6NCW0 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.38□□□□□ -1.55
USP17L3A6NCW0 BPIFA4P-203ENST00000603168 689 ntBASIC5.38□□□□□ -1.55
USP17L3A6NCW0 AC079587.1-201ENST00000603846 277 ntBASIC5.38□□□□□ -1.55
USP17L3A6NCW0 MIR8059-201ENST00000620427 81 ntBASIC5.38□□□□□ -1.55
USP17L3A6NCW0 AC034229.5-201ENST00000624258 185 ntBASIC5.38□□□□□ -1.55
USP17L3A6NCW0 AC140479.6-201ENST00000633535 357 ntBASIC5.38□□□□□ -1.55
USP17L3A6NCW0 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP17L3A6NCW0 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
USP17L3A6NCW0 AC015813.6-201ENST00000624409 5808 ntBASIC5.38□□□□□ -1.55
USP17L3A6NCW0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP17L3A6NCW0 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.38□□□□□ -1.55
USP17L3A6NCW0 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP17L3A6NCW0 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
USP17L3A6NCW0 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USP17L3A6NCW0 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP17L3A6NCW0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP17L3A6NCW0 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP17L3A6NCW0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
USP17L3A6NCW0 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
USP17L3A6NCW0 Y_RNA.222-201ENST00000364264 102 ntBASIC5.37□□□□□ -1.55
USP17L3A6NCW0 Y_RNA.245-201ENST00000364493 95 ntBASIC5.37□□□□□ -1.55
USP17L3A6NCW0 SNORD14B-201ENST00000364533 90 ntBASIC5.37□□□□□ -1.55
USP17L3A6NCW0 AL592291.1-201ENST00000403830 352 ntBASIC5.37□□□□□ -1.55
USP17L3A6NCW0 PPIAP31-201ENST00000405422 495 ntBASIC5.37□□□□□ -1.55
USP17L3A6NCW0 AL603908.1-201ENST00000406098 201 ntBASIC5.37□□□□□ -1.55
USP17L3A6NCW0 AL592148.1-201ENST00000413568 445 ntBASIC5.37□□□□□ -1.55
USP17L3A6NCW0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms