Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 RNA5SP310-201ENST00000459084 116 ntBASIC0.9□□□□□ -2.27
CNOT1A5YKK6 FO393415.2-201ENST00000480085 343 ntBASIC0.9□□□□□ -2.27
CNOT1A5YKK6 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.9□□□□□ -2.27
CNOT1A5YKK6 AC133963.2-201ENST00000513686 578 ntBASIC0.9□□□□□ -2.27
CNOT1A5YKK6 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.9□□□□□ -2.27
CNOT1A5YKK6 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.9□□□□□ -2.27
CNOT1A5YKK6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.9□□□□□ -2.27
CNOT1A5YKK6 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.9□□□□□ -2.27
CNOT1A5YKK6 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.9□□□□□ -2.27
CNOT1A5YKK6 MIR4711-201ENST00000578274 70 ntBASIC0.9□□□□□ -2.27
CNOT1A5YKK6 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.9□□□□□ -2.27
CNOT1A5YKK6 AC012254.4-201ENST00000588843 273 ntBASIC0.9□□□□□ -2.27
CNOT1A5YKK6 AC012443.1-201ENST00000605605 231 ntBASIC0.9□□□□□ -2.27
CNOT1A5YKK6 AC009229.3-201ENST00000608056 282 ntBASIC0.9□□□□□ -2.27
CNOT1A5YKK6 AC091932.3-201ENST00000624223 323 ntBASIC0.9□□□□□ -2.27
CNOT1A5YKK6 FAM157B-203ENST00000639350 358 ntBASIC0.9□□□□□ -2.27
CNOT1A5YKK6 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
CNOT1A5YKK6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.9□□□□□ -2.27
CNOT1A5YKK6 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC0.9□□□□□ -2.27
CNOT1A5YKK6 RNU6-418P-201ENST00000384035 107 ntBASIC0.9□□□□□ -2.27
CNOT1A5YKK6 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.9□□□□□ -2.27
CNOT1A5YKK6 CISD1P1-201ENST00000393907 327 ntBASIC0.9□□□□□ -2.27
CNOT1A5YKK6 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC0.9□□□□□ -2.27
CNOT1A5YKK6 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.9□□□□□ -2.27
CNOT1A5YKK6 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.9□□□□□ -2.27
CNOT1A5YKK6 MIR5589-201ENST00000579442 60 ntBASIC0.9□□□□□ -2.27
CNOT1A5YKK6 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.9□□□□□ -2.27
CNOT1A5YKK6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.89□□□□□ -2.27
CNOT1A5YKK6 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
CNOT1A5YKK6 SNORA3A-201ENST00000364113 130 ntBASIC0.89□□□□□ -2.27
CNOT1A5YKK6 OR1L1-202ENST00000373686 1083 ntBASIC0.89□□□□□ -2.27
CNOT1A5YKK6 MIR329-2-201ENST00000385029 84 ntBASIC0.89□□□□□ -2.27
CNOT1A5YKK6 MT-TP-201ENST00000387461 68 ntBASIC0.89□□□□□ -2.27
CNOT1A5YKK6 MTCYBP24-201ENST00000420387 1106 ntBASIC0.89□□□□□ -2.27
CNOT1A5YKK6 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC0.89□□□□□ -2.27
CNOT1A5YKK6 AC012497.1-201ENST00000429392 575 ntBASIC0.89□□□□□ -2.27
CNOT1A5YKK6 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.89□□□□□ -2.27
CNOT1A5YKK6 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC0.89□□□□□ -2.27
CNOT1A5YKK6 AC087588.1-201ENST00000462203 316 ntBASIC0.89□□□□□ -2.27
CNOT1A5YKK6 LARP7P4-201ENST00000481075 878 ntBASIC0.89□□□□□ -2.27
CNOT1A5YKK6 COL6A4P2-205ENST00000509855 506 ntBASIC0.89□□□□□ -2.27
CNOT1A5YKK6 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.89□□□□□ -2.27
CNOT1A5YKK6 AC093838.1-201ENST00000613014 469 ntBASIC0.89□□□□□ -2.27
CNOT1A5YKK6 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.89□□□□□ -2.27
CNOT1A5YKK6 AC109809.1-201ENST00000619665 545 ntBASIC0.89□□□□□ -2.27
CNOT1A5YKK6 ZNF37BP-203ENST00000452306 1352 ntBASIC0.89□□□□□ -2.27
CNOT1A5YKK6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
CNOT1A5YKK6 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
CNOT1A5YKK6 MIR513A1-201ENST00000385138 129 ntBASIC0.89□□□□□ -2.27
CNOT1A5YKK6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.89□□□□□ -2.27
CNOT1A5YKK6 AC004383.1-201ENST00000438135 289 ntBASIC0.89□□□□□ -2.27
CNOT1A5YKK6 RPS29P28-201ENST00000446439 141 ntBASIC0.89□□□□□ -2.27
CNOT1A5YKK6 RNU1-98P-201ENST00000458992 160 ntBASIC0.89□□□□□ -2.27
CNOT1A5YKK6 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.89□□□□□ -2.27
CNOT1A5YKK6 RNU2-44P-201ENST00000516795 194 ntBASIC0.89□□□□□ -2.27
CNOT1A5YKK6 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC0.89□□□□□ -2.27
CNOT1A5YKK6 AC106028.5-201ENST00000610332 395 ntBASIC0.89□□□□□ -2.27
CNOT1A5YKK6 UCA1.1-201ENST00000620952 75 ntBASIC0.89□□□□□ -2.27
CNOT1A5YKK6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
CNOT1A5YKK6 RNU1-23P-201ENST00000363361 144 ntBASIC0.88□□□□□ -2.27
CNOT1A5YKK6 SNORD14B-201ENST00000364533 90 ntBASIC0.88□□□□□ -2.27
CNOT1A5YKK6 RN7SKP51-201ENST00000410781 304 ntBASIC0.88□□□□□ -2.27
CNOT1A5YKK6 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.88□□□□□ -2.27
CNOT1A5YKK6 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.88□□□□□ -2.27
CNOT1A5YKK6 UBE2D3P2-201ENST00000424409 445 ntBASIC0.88□□□□□ -2.27
CNOT1A5YKK6 MTCO3P46-201ENST00000425787 232 ntBASIC0.88□□□□□ -2.27
CNOT1A5YKK6 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.88□□□□□ -2.27
CNOT1A5YKK6 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC0.88□□□□□ -2.27
CNOT1A5YKK6 RPL26P9-201ENST00000457466 433 ntBASIC0.88□□□□□ -2.27
CNOT1A5YKK6 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC0.88□□□□□ -2.27
CNOT1A5YKK6 AC012213.4-201ENST00000606457 354 ntBASIC0.88□□□□□ -2.27
CNOT1A5YKK6 FAM157A-202ENST00000615155 405 ntBASIC0.88□□□□□ -2.27
CNOT1A5YKK6 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CNOT1A5YKK6 RNU6-532P-201ENST00000384318 107 ntBASIC0.88□□□□□ -2.27
CNOT1A5YKK6 MIR493-201ENST00000385254 89 ntBASIC0.88□□□□□ -2.27
CNOT1A5YKK6 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.88□□□□□ -2.27
CNOT1A5YKK6 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.88□□□□□ -2.27
CNOT1A5YKK6 AC008379.1-201ENST00000463655 464 ntBASIC0.88□□□□□ -2.27
CNOT1A5YKK6 AC104806.1-201ENST00000508720 308 ntBASIC0.88□□□□□ -2.27
CNOT1A5YKK6 DEFB108E-201ENST00000524692 240 ntBASIC0.88□□□□□ -2.27
CNOT1A5YKK6 CBX3P7-201ENST00000532876 502 ntBASIC0.88□□□□□ -2.27
CNOT1A5YKK6 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.88□□□□□ -2.27
CNOT1A5YKK6 AC078899.2-201ENST00000595282 212 ntBASIC0.88□□□□□ -2.27
CNOT1A5YKK6 AL355810.1-201ENST00000614629 552 ntBASIC0.88□□□□□ -2.27
CNOT1A5YKK6 AC011330.2-201ENST00000621680 635 ntBASIC0.88□□□□□ -2.27
CNOT1A5YKK6 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CNOT1A5YKK6 MIR126-201ENST00000362291 85 ntBASIC0.87□□□□□ -2.27
CNOT1A5YKK6 RNU6-173P-201ENST00000364215 104 ntBASIC0.87□□□□□ -2.27
CNOT1A5YKK6 TXNP7-201ENST00000406296 293 ntBASIC0.87□□□□□ -2.27
CNOT1A5YKK6 RNU6-920P-201ENST00000410926 92 ntBASIC0.87□□□□□ -2.27
CNOT1A5YKK6 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.87□□□□□ -2.27
CNOT1A5YKK6 SDAD1P3-201ENST00000427380 333 ntBASIC0.87□□□□□ -2.27
CNOT1A5YKK6 CABYRP1-201ENST00000465493 1045 ntBASIC0.87□□□□□ -2.27
CNOT1A5YKK6 HMGB3P17-201ENST00000504195 649 ntBASIC0.87□□□□□ -2.27
CNOT1A5YKK6 AC020699.1-201ENST00000505161 445 ntBASIC0.87□□□□□ -2.27
CNOT1A5YKK6 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.87□□□□□ -2.27
CNOT1A5YKK6 SCARNA1-201ENST00000517138 166 ntBASIC0.87□□□□□ -2.27
CNOT1A5YKK6 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.87□□□□□ -2.27
CNOT1A5YKK6 AL391834.1-201ENST00000609609 560 ntBASIC0.87□□□□□ -2.27
CNOT1A5YKK6 NACAP2-201ENST00000318548 624 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms