Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC66A2RUB6 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC66A2RUB6 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CCDC66A2RUB6 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC66A2RUB6 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CCDC66A2RUB6 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC66A2RUB6 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC66A2RUB6 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC66A2RUB6 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC66A2RUB6 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC66A2RUB6 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC66A2RUB6 IPO8P1-201ENST00000455509 3109 ntBASIC4.34□□□□□ -1.71
CCDC66A2RUB6 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC66A2RUB6 RNA5SP167-201ENST00000365461 116 ntBASIC4.34□□□□□ -1.71
CCDC66A2RUB6 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC66A2RUB6 RN7SKP158-201ENST00000410453 326 ntBASIC4.34□□□□□ -1.71
CCDC66A2RUB6 RNU4-14P-201ENST00000410858 122 ntBASIC4.34□□□□□ -1.71
CCDC66A2RUB6 ELOCP19-201ENST00000411919 318 ntBASIC4.34□□□□□ -1.71
CCDC66A2RUB6 RPS12P24-201ENST00000412619 387 ntBASIC4.34□□□□□ -1.71
CCDC66A2RUB6 RPS15AP6-201ENST00000420703 385 ntBASIC4.34□□□□□ -1.71
CCDC66A2RUB6 AL160275.3-201ENST00000423876 471 ntBASIC4.34□□□□□ -1.71
CCDC66A2RUB6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC66A2RUB6 AC008264.1-201ENST00000447612 367 ntBASIC4.34□□□□□ -1.71
CCDC66A2RUB6 AC010285.1-201ENST00000470580 392 ntBASIC4.34□□□□□ -1.71
CCDC66A2RUB6 AC109327.1-201ENST00000471666 403 ntBASIC4.34□□□□□ -1.71
CCDC66A2RUB6 AC108860.1-201ENST00000484521 383 ntBASIC4.34□□□□□ -1.71
CCDC66A2RUB6 AC026979.1-201ENST00000492525 396 ntBASIC4.34□□□□□ -1.71
CCDC66A2RUB6 AC078817.1-201ENST00000492623 435 ntBASIC4.34□□□□□ -1.71
CCDC66A2RUB6 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC66A2RUB6 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC66A2RUB6 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC66A2RUB6 RNU6-1170P-201ENST00000515974 106 ntBASIC4.34□□□□□ -1.71
CCDC66A2RUB6 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.34□□□□□ -1.71
CCDC66A2RUB6 AC093249.1-201ENST00000567049 203 ntBASIC4.34□□□□□ -1.71
CCDC66A2RUB6 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC66A2RUB6 AC083809.1-201ENST00000615051 472 ntBASIC4.34□□□□□ -1.71
CCDC66A2RUB6 AC090971.5-201ENST00000621102 293 ntBASIC4.34□□□□□ -1.71
CCDC66A2RUB6 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CCDC66A2RUB6 AL773545.4-201ENST00000637262 310 ntBASIC4.34□□□□□ -1.71
CCDC66A2RUB6 AL513478.4-201ENST00000641636 310 ntBASIC4.34□□□□□ -1.71
CCDC66A2RUB6 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC66A2RUB6 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC66A2RUB6 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC66A2RUB6 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC66A2RUB6 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC66A2RUB6 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC66A2RUB6 RNU6-692P-201ENST00000384496 107 ntBASIC4.33□□□□□ -1.72
CCDC66A2RUB6 HSPE1P8-201ENST00000406997 288 ntBASIC4.33□□□□□ -1.72
CCDC66A2RUB6 AL513331.1-201ENST00000411908 397 ntBASIC4.33□□□□□ -1.72
CCDC66A2RUB6 RPL37P10-201ENST00000412884 288 ntBASIC4.33□□□□□ -1.72
CCDC66A2RUB6 RPL31P12-201ENST00000422587 358 ntBASIC4.33□□□□□ -1.72
CCDC66A2RUB6 AL353729.1-201ENST00000425044 720 ntBASIC4.33□□□□□ -1.72
CCDC66A2RUB6 RPS29P17-201ENST00000430795 166 ntBASIC4.33□□□□□ -1.72
CCDC66A2RUB6 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC66A2RUB6 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC66A2RUB6 CEACAMP4-201ENST00000457676 421 ntBASIC4.33□□□□□ -1.72
CCDC66A2RUB6 RPL23AP24-201ENST00000458203 385 ntBASIC4.33□□□□□ -1.72
CCDC66A2RUB6 RPL23AP62-201ENST00000463396 453 ntBASIC4.33□□□□□ -1.72
CCDC66A2RUB6 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC66A2RUB6 HMGB1P22-201ENST00000505315 124 ntBASIC4.33□□□□□ -1.72
CCDC66A2RUB6 AC104136.1-201ENST00000512969 394 ntBASIC4.33□□□□□ -1.72
CCDC66A2RUB6 SNORA14.1-201ENST00000516113 141 ntBASIC4.33□□□□□ -1.72
CCDC66A2RUB6 Y_RNA.718-201ENST00000517110 102 ntBASIC4.33□□□□□ -1.72
CCDC66A2RUB6 COPS8P3-201ENST00000526024 482 ntBASIC4.33□□□□□ -1.72
CCDC66A2RUB6 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC66A2RUB6 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC66A2RUB6 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC66A2RUB6 AL360181.4-201ENST00000621752 134 ntBASIC4.33□□□□□ -1.72
CCDC66A2RUB6 AL359757.2-201ENST00000624309 274 ntBASIC4.33□□□□□ -1.72
CCDC66A2RUB6 MTND4LP32-201ENST00000636111 270 ntBASIC4.33□□□□□ -1.72
CCDC66A2RUB6 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC66A2RUB6 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC66A2RUB6 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC66A2RUB6 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC66A2RUB6 OTUD4P1-201ENST00000237841 3067 ntBASIC4.32□□□□□ -1.72
CCDC66A2RUB6 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC66A2RUB6 CEP170P1-201ENST00000502249 4587 ntBASIC4.32□□□□□ -1.72
CCDC66A2RUB6 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC66A2RUB6 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC66A2RUB6 RNU6-43P-201ENST00000384302 107 ntBASIC4.32□□□□□ -1.72
CCDC66A2RUB6 SNORD116-29-201ENST00000384516 83 ntBASIC4.32□□□□□ -1.72
CCDC66A2RUB6 Y_RNA.579-201ENST00000390939 94 ntBASIC4.32□□□□□ -1.72
CCDC66A2RUB6 MIR450B-201ENST00000401182 78 ntBASIC4.32□□□□□ -1.72
CCDC66A2RUB6 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC66A2RUB6 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC66A2RUB6 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC66A2RUB6 RPS24P6-201ENST00000452670 400 ntBASIC4.32□□□□□ -1.72
CCDC66A2RUB6 RNA5SP246-201ENST00000458909 119 ntBASIC4.32□□□□□ -1.72
CCDC66A2RUB6 RPL37P6-201ENST00000460682 294 ntBASIC4.32□□□□□ -1.72
CCDC66A2RUB6 RN7SL271P-201ENST00000487601 295 ntBASIC4.32□□□□□ -1.72
CCDC66A2RUB6 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC66A2RUB6 MTND5P5-201ENST00000503764 376 ntBASIC4.32□□□□□ -1.72
CCDC66A2RUB6 AC008958.1-201ENST00000511047 682 ntBASIC4.32□□□□□ -1.72
CCDC66A2RUB6 RN7SKP24-201ENST00000515888 284 ntBASIC4.32□□□□□ -1.72
CCDC66A2RUB6 RNU6-927P-201ENST00000516199 100 ntBASIC4.32□□□□□ -1.72
CCDC66A2RUB6 RNU7-143P-201ENST00000516781 65 ntBASIC4.32□□□□□ -1.72
CCDC66A2RUB6 RANP9-201ENST00000519957 271 ntBASIC4.32□□□□□ -1.72
CCDC66A2RUB6 AP005639.2-201ENST00000527592 928 ntBASIC4.32□□□□□ -1.72
CCDC66A2RUB6 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC66A2RUB6 AC007151.1-201ENST00000572774 483 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms