Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 MTND4LP5-201ENST00000605152 292 ntBASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 AC007349.4-201ENST00000608114 532 ntBASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 AC026634.1-201ENST00000634369 198 ntBASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 AP000560.1-201ENST00000624150 1937 ntBASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 AC096649.2-201ENST00000416186 393 ntBASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 MRPL35P3-201ENST00000421557 364 ntBASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 AC092648.1-201ENST00000425870 423 ntBASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 SNORA31.22-201ENST00000517204 135 ntBASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 ZNF705CP-201ENST00000530515 889 ntBASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 AC025918.2-201ENST00000558683 763 ntBASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 AC009268.1-201ENST00000561352 1203 ntBASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 AC024619.4-201ENST00000580924 316 ntBASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 AC105245.1-201ENST00000581934 244 ntBASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 AL020997.3-201ENST00000602843 359 ntBASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 AC024581.2-201ENST00000619986 252 ntBASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 MIR6852-201ENST00000621699 66 ntBASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 SCARNA15.3-201ENST00000626315 122 ntBASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 SCARNA4.1-201ENST00000628597 123 ntBASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.03□□□□□ -2.24
TCRBV3S1A0A5B6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.03□□□□□ -2.25
TCRBV3S1A0A5B6 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 RNU6-338P-201ENST00000383888 105 ntBASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 RNA5SP212-201ENST00000391223 107 ntBASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 NDUFS5P1-201ENST00000405668 289 ntBASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 BOLA3P4-201ENST00000418151 400 ntBASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 AL590383.1-201ENST00000428602 75 ntBASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 RPL23AP16-201ENST00000441715 421 ntBASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 RFC5P1-201ENST00000454419 874 ntBASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 AC008379.1-201ENST00000463655 464 ntBASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 TRBV12-1-201ENST00000479785 344 ntBASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 HMGB1P35-201ENST00000503360 598 ntBASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 MIR4303-201ENST00000581299 66 ntBASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 AL022067.1-201ENST00000602426 454 ntBASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 FRG1HP-204ENST00000617940 757 ntBASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 AC087821.2-201ENST00000637086 450 ntBASIC1.02□□□□□ -2.25
TCRBV3S1A0A5B6 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 MIR514A1-201ENST00000385133 98 ntBASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 AL021407.1-201ENST00000404531 386 ntBASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 RNU6-516P-201ENST00000411381 104 ntBASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 BEND7P1-201ENST00000422058 457 ntBASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 AL590233.1-201ENST00000430017 456 ntBASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 SCARNA15.2-201ENST00000516409 127 ntBASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 RNU6-1256P-201ENST00000516539 103 ntBASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 RNU6-362P-201ENST00000516736 90 ntBASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 CR383656.7-201ENST00000548164 174 ntBASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 AL031274.2-201ENST00000599419 203 ntBASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 AP001485.1-201ENST00000604799 199 ntBASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 VN1R9P-201ENST00000614184 867 ntBASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 AP003476.1-201ENST00000623984 516 ntBASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 AL590396.2-201ENST00000636511 1041 ntBASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 SEC63P2-201ENST00000503863 1939 ntBASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 AC010889.1-201ENST00000566193 2666 ntBASIC1.01□□□□□ -2.25
TCRBV3S1A0A5B6 OR4G11P-202ENST00000642116 1414 ntBASIC1□□□□□ -2.25
TCRBV3S1A0A5B6 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
TCRBV3S1A0A5B6 MFSD8-213ENST00000641134 1327 ntBASIC1□□□□□ -2.25
TCRBV3S1A0A5B6 RNU4-91P-201ENST00000364778 135 ntBASIC1□□□□□ -2.25
TCRBV3S1A0A5B6 SNORA22-201ENST00000383907 134 ntBASIC1□□□□□ -2.25
TCRBV3S1A0A5B6 SNORA51.6-201ENST00000384151 125 ntBASIC1□□□□□ -2.25
TCRBV3S1A0A5B6 SNORA22C-201ENST00000384614 134 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms