Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 CR392039.5-201ENST00000623201 510 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 U6.98-201ENST00000637157 84 ntBASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC163A0A0D9SF12 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 SNORD3E-201ENST00000362899 217 ntBASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 PGBD4P6-201ENST00000421501 610 ntBASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 RPL23AP46-201ENST00000438548 490 ntBASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 RPL35AP15-201ENST00000468042 339 ntBASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 AC026371.1-201ENST00000551867 419 ntBASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 AL606490.9-201ENST00000603331 271 ntBASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 SNORA51-201ENST00000606420 132 ntBASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 AL110115.1-201ENST00000614396 364 ntBASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 FAM157A-202ENST00000615155 405 ntBASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 AC015914.2-201ENST00000618167 288 ntBASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 AL160413.1-201ENST00000622780 310 ntBASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC163A0A0D9SF12 AC092435.4-201ENST00000623012 4159 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 AC002546.1-201ENST00000588041 2504 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 Y_RNA.324-201ENST00000365165 102 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 RNU1-63P-201ENST00000383902 164 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 PTMAP5-201ENST00000393073 333 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 AL356057.2-201ENST00000403318 432 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 AL353621.1-201ENST00000418219 243 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 TMEM167AP1-201ENST00000423409 219 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 AL590632.1-201ENST00000424289 371 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 UBE2D3P2-201ENST00000424409 445 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 AC017083.1-201ENST00000428093 483 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 RPL23AP83-201ENST00000434984 473 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 AC007677.1-201ENST00000445757 515 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 PRSS3P4-201ENST00000453323 162 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 RPL12P25-201ENST00000455592 494 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 MTND5P5-201ENST00000503764 376 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 AC079140.5-201ENST00000507882 310 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 RNU1-86P-201ENST00000516108 154 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 MIR892C-201ENST00000516410 77 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 RNU1-107P-201ENST00000516617 154 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 SNORA25.17-201ENST00000517184 124 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 AL121821.2-201ENST00000556081 394 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 AC136601.2-201ENST00000604356 474 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 MIR6128-201ENST00000615528 109 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 AC126177.8-201ENST00000618339 1015 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 AC012442.3-202ENST00000636742 206 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 U6.99-201ENST00000637524 83 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 AC008013.2-202ENST00000637965 364 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 AC099654.10-201ENST00000640395 161 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 ZNF519P1-201ENST00000449011 1626 ntBASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC163A0A0D9SF12 RPS4XP5-202ENST00000449995 1334 ntBASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 AL049641.1-201ENST00000441055 1948 ntBASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 Y_RNA.339-201ENST00000365325 102 ntBASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 SNORA75B-201ENST00000384053 137 ntBASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 Y_RNA.431-201ENST00000384086 102 ntBASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 RNU6-1297P-201ENST00000384415 104 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms