Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AL133241.1-201ENST00000556832 487 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 AC027807.1-201ENST00000559921 996 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 AC007229.1-201ENST00000590455 412 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 AL109918.3-201ENST00000603072 338 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 AP000403.1-201ENST00000603349 851 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 AC007349.4-201ENST00000608114 532 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 AL627230.6-201ENST00000611129 280 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 AC023158.2-201ENST00000614876 543 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 AL445264.1-201ENST00000621719 171 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 CDR1-202ENST00000625883 1485 ntBASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 AL356473.1-201ENST00000406203 1408 ntBASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 HSPA8P4-201ENST00000511877 1920 ntBASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 RNU6-236P-201ENST00000363886 106 ntBASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 RNU2-20P-201ENST00000410425 191 ntBASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 RPS20P20-201ENST00000460498 340 ntBASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 AL121769.1-201ENST00000469473 401 ntBASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 SNORA31.6-201ENST00000516241 130 ntBASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 RNU6-1225P-201ENST00000516336 65 ntBASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 AC118273.2-201ENST00000532092 465 ntBASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 AL359212.1-201ENST00000556608 614 ntBASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 ANP32BP3-201ENST00000559213 706 ntBASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 AC069294.1-201ENST00000608397 350 ntBASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 U4atac.1-201ENST00000618345 95 ntBASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 YWHAEP7-203ENST00000622054 312 ntBASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.51□□□□□ -2.17
TRAV41A0A0B4J266 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 AC010889.1-201ENST00000566193 2666 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 SNORA23-201ENST00000365128 182 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 MIR1261-201ENST00000408659 82 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 RN7SKP158-201ENST00000410453 326 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 RNA5SP338-201ENST00000410495 85 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 RNU2-40P-201ENST00000410833 196 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 AIMP1P2-201ENST00000425294 312 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 MED14P1-201ENST00000430517 648 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 FABP5P13-201ENST00000452144 328 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 RPL18AP17-201ENST00000455326 198 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 RPS20P22-201ENST00000473700 357 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 MTAPP1-201ENST00000489154 819 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 RNU6-583P-201ENST00000516012 92 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 RNY4P37-201ENST00000516225 96 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 DEFB130C-202ENST00000530001 230 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 AP000873.5-201ENST00000533906 236 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 CYCSP2-201ENST00000558168 301 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 SNRPGP19-201ENST00000603826 189 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 AC069545.1-201ENST00000605671 358 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 AL021368.1-201ENST00000607490 540 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 AC103710.2-201ENST00000609912 942 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 AC013476.2-201ENST00000614456 459 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 AP002791.1-201ENST00000623291 381 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 AC109454.4-201ENST00000623411 649 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 AL356094.1-201ENST00000624663 1212 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 AL159972.1-201ENST00000625150 448 ntBASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
TRAV41A0A0B4J266 AL138713.1-201ENST00000624026 2130 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 HSPE1P11-201ENST00000339579 310 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 OR56A5-201ENST00000340110 738 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 RNU6-637P-201ENST00000384050 107 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 MIR583-201ENST00000384846 75 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 MTCO1P56-201ENST00000401674 224 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 RNU6-1140P-201ENST00000410517 106 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 RPL17P12-201ENST00000413391 526 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 AL451054.2-201ENST00000420896 202 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 AC007435.1-201ENST00000421086 415 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 RPS3AP44-201ENST00000425466 790 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 COX7BP2-201ENST00000437976 242 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 AC002381.1-201ENST00000447049 280 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms