Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC069294.1-201ENST00000608397 350 ntBASIC1.28□□□□□ -2.2
TRAV27A0A087WT01 AC108479.2-201ENST00000617314 601 ntBASIC1.28□□□□□ -2.2
TRAV27A0A087WT01 AC006213.5-201ENST00000619673 288 ntBASIC1.28□□□□□ -2.2
TRAV27A0A087WT01 AC109454.4-201ENST00000623411 649 ntBASIC1.28□□□□□ -2.2
TRAV27A0A087WT01 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.28□□□□□ -2.2
TRAV27A0A087WT01 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.28□□□□□ -2.2
TRAV27A0A087WT01 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
TRAV27A0A087WT01 AP005901.5-201ENST00000545779 1796 ntBASIC1.28□□□□□ -2.2
TRAV27A0A087WT01 CDC27P3-201ENST00000635418 1910 ntBASIC1.28□□□□□ -2.2
TRAV27A0A087WT01 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.28□□□□□ -2.2
TRAV27A0A087WT01 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 RNU6-884P-201ENST00000363889 107 ntBASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 RNU6-741P-201ENST00000383889 107 ntBASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 RNU6-140P-201ENST00000384566 108 ntBASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 RNU6-19P-201ENST00000384718 107 ntBASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 RNU6-174P-201ENST00000410406 106 ntBASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 MTND4LP14-201ENST00000429447 288 ntBASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 AL353691.1-201ENST00000451332 387 ntBASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 RPL12P25-201ENST00000455592 494 ntBASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 AC096745.1-201ENST00000509945 370 ntBASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 LTV1P1-201ENST00000510683 1237 ntBASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 AP004607.1-201ENST00000524456 203 ntBASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 AC090502.2-201ENST00000549267 280 ntBASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 AL132857.1-201ENST00000555180 708 ntBASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 AC027807.1-201ENST00000559921 996 ntBASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 AL158827.2-201ENST00000602494 330 ntBASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 AC104763.3-201ENST00000613765 618 ntBASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 AC008443.7-201ENST00000622195 246 ntBASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 AL691447.3-201ENST00000635020 330 ntBASIC1.27□□□□□ -2.21
TRAV27A0A087WT01 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 AC010889.1-201ENST00000566193 2666 ntBASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 AL356473.1-201ENST00000406203 1408 ntBASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 MFSD8-213ENST00000641134 1327 ntBASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 RNU1-62P-201ENST00000362599 164 ntBASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 RPL23AP29-201ENST00000397284 453 ntBASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 AL109755.1-201ENST00000401791 649 ntBASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 AL356131.1-201ENST00000405826 414 ntBASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 OR9R1P-201ENST00000412200 877 ntBASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 VN1R36P-201ENST00000414936 291 ntBASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 AC244636.1-201ENST00000421152 228 ntBASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 RAC1P8-201ENST00000427086 527 ntBASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 AL590623.1-201ENST00000427864 105 ntBASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 MED14P1-201ENST00000430517 648 ntBASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 AC007000.2-201ENST00000442564 487 ntBASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 HMGB1P36-201ENST00000487709 576 ntBASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 RNU6-970P-201ENST00000516312 107 ntBASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 FTX_3.1-201ENST00000610451 147 ntBASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.26□□□□□ -2.21
TRAV27A0A087WT01 U8.3-201ENST00000363321 132 ntBASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 HMGN2P39-201ENST00000398005 273 ntBASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 PTGES3P2-201ENST00000407942 482 ntBASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 MIR1261-201ENST00000408659 82 ntBASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 AC074117.2-201ENST00000417130 397 ntBASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 CCDC58P2-201ENST00000417131 366 ntBASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 AC019178.2-201ENST00000423595 505 ntBASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 HMGB1P18-201ENST00000438801 619 ntBASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 AC010095.1-201ENST00000443543 144 ntBASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 AC140059.1-201ENST00000489238 361 ntBASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 AC117522.2-201ENST00000510049 657 ntBASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 AF213884.2-201ENST00000510417 903 ntBASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 RNA5SP135-201ENST00000517019 125 ntBASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 AC105245.1-201ENST00000581934 244 ntBASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 AP001429.1-201ENST00000602568 530 ntBASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 AC133794.1-201ENST00000602731 914 ntBASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 AL078605.1-201ENST00000603529 500 ntBASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 AC132825.7-201ENST00000638744 335 ntBASIC1.25□□□□□ -2.21
TRAV27A0A087WT01 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms