Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MTND1P37-201ENST00000636562 264 ntBASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 AC008568.2-201ENST00000623862 2313 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 RNU6-50P-201ENST00000362356 103 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 Y_RNA.58-201ENST00000362807 102 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 Y_RNA.154-201ENST00000363624 102 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 U3.12-201ENST00000364498 214 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 RNY3P1-201ENST00000365085 102 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 SNORD81.2-201ENST00000365153 76 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 RNY3-201ENST00000365484 102 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 Y_RNA.490-201ENST00000384413 102 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 RNU6-1127P-201ENST00000384580 107 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 MTND3P8-201ENST00000412909 339 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 AC092809.3-201ENST00000415453 231 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 AC007390.1-201ENST00000415722 356 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 BX842559.1-201ENST00000419615 532 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 AL645937.1-202ENST00000421799 937 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 AC008264.1-201ENST00000447612 367 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 AL451050.1-201ENST00000450126 415 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 RPL21P104-201ENST00000464143 478 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 RPS20P22-201ENST00000473700 357 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 AP001086.1-201ENST00000494882 321 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 FAM206BP-201ENST00000510179 541 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 APOOP4-201ENST00000513530 597 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 Y_RNA.665-201ENST00000516177 98 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 SNORA70.16-201ENST00000516390 95 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 RNA5SP468-201ENST00000516782 93 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 Y_RNA.701-201ENST00000516812 110 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 RANP9-201ENST00000519957 271 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 RPL7P20-201ENST00000520308 745 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 AC107953.1-201ENST00000522216 297 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 MIR3941-201ENST00000582572 103 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 uc_338.5-201ENST00000611839 155 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 uc_338.32-201ENST00000615087 172 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 AC091953.5-201ENST00000622919 233 ntBASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHB1Q9Y5F3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 UBE3AP2-201ENST00000429033 2259 ntBASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 RNA5SP119-201ENST00000362715 117 ntBASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 RNA5SP399-201ENST00000364003 117 ntBASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 RNU6-522P-201ENST00000364497 107 ntBASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 Y_RNA.399-201ENST00000383955 105 ntBASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 RNU6-213P-201ENST00000384051 104 ntBASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 RNU6-434P-201ENST00000384376 107 ntBASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 RNU6-393P-201ENST00000384475 107 ntBASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 MIR30B-201ENST00000384850 88 ntBASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 AL356057.2-201ENST00000403318 432 ntBASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 AL356432.1-201ENST00000405809 419 ntBASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 RNU6-1148P-201ENST00000410992 104 ntBASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 RPL7P10-201ENST00000417407 739 ntBASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 AL353678.1-201ENST00000422735 741 ntBASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 AL160275.3-201ENST00000423876 471 ntBASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 OR11H5P-201ENST00000554039 926 ntBASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 AC005668.1-201ENST00000571142 476 ntBASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 AL022345.1-201ENST00000607292 135 ntBASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 AL442067.2-201ENST00000614033 363 ntBASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 AC084757.4-201ENST00000616350 526 ntBASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHB1Q9Y5F3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms