Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 AL672167.1-205ENST00000641112 3080 ntBASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 AC083899.1-201ENST00000454465 3819 ntBASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB3Q9Y5E6 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHB3Q9Y5E6 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHB3Q9Y5E6 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHB3Q9Y5E6 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PCDHB3Q9Y5E6 RPS12P23-201ENST00000419579 400 ntBASIC5.47□□□□□ -1.53
PCDHB3Q9Y5E6 AC007560.1-201ENST00000426912 237 ntBASIC5.47□□□□□ -1.53
PCDHB3Q9Y5E6 AL359073.1-201ENST00000448036 403 ntBASIC5.47□□□□□ -1.53
PCDHB3Q9Y5E6 Y_RNA.637-201ENST00000459424 114 ntBASIC5.47□□□□□ -1.53
PCDHB3Q9Y5E6 AL049874.1-201ENST00000489560 388 ntBASIC5.47□□□□□ -1.53
PCDHB3Q9Y5E6 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDHB3Q9Y5E6 AC020593.1-201ENST00000507399 299 ntBASIC5.47□□□□□ -1.53
PCDHB3Q9Y5E6 FCF1P8-201ENST00000510322 597 ntBASIC5.47□□□□□ -1.53
PCDHB3Q9Y5E6 RN7SKP164-201ENST00000516138 266 ntBASIC5.47□□□□□ -1.53
PCDHB3Q9Y5E6 AC027369.5-201ENST00000533838 755 ntBASIC5.47□□□□□ -1.53
PCDHB3Q9Y5E6 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDHB3Q9Y5E6 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDHB3Q9Y5E6 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHB3Q9Y5E6 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHB3Q9Y5E6 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHB3Q9Y5E6 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PCDHB3Q9Y5E6 AP004607.3-201ENST00000530354 3915 ntBASIC5.47□□□□□ -1.53
PCDHB3Q9Y5E6 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHB3Q9Y5E6 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHB3Q9Y5E6 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHB3Q9Y5E6 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
PCDHB3Q9Y5E6 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PCDHB3Q9Y5E6 OR9K1P-202ENST00000641111 3217 ntBASIC5.46□□□□□ -1.53
PCDHB3Q9Y5E6 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PCDHB3Q9Y5E6 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PCDHB3Q9Y5E6 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PCDHB3Q9Y5E6 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
PCDHB3Q9Y5E6 SRP72P2-201ENST00000344851 1979 ntBASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 AL159987.1-201ENST00000347911 293 ntBASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 RNU6-137P-201ENST00000363680 108 ntBASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 SNORA70.6-201ENST00000383934 134 ntBASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 SNORA29-201ENST00000384183 140 ntBASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 GPS2P1-201ENST00000411761 986 ntBASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 AL121594.1-201ENST00000475906 575 ntBASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 RPL32P33-201ENST00000487023 394 ntBASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 RNU6-168P-201ENST00000516189 101 ntBASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 AC021006.3-201ENST00000530771 192 ntBASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 AC137627.1-201ENST00000545761 289 ntBASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 AC090877.1-201ENST00000561418 344 ntBASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 DEFB117-201ENST00000602356 141 ntBASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 AC010632.3-201ENST00000611377 369 ntBASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 MIR6837-201ENST00000620884 64 ntBASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 LINC01963-201ENST00000562038 3148 ntBASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 MAPK10-328ENST00000641553 4009 ntBASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDHB3Q9Y5E6 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 Y_RNA.101-201ENST00000363154 102 ntBASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 RNU6-103P-201ENST00000363686 107 ntBASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 Y_RNA.337-201ENST00000365312 102 ntBASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 OR1L6-202ENST00000373684 1044 ntBASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 MIR487A-201ENST00000385009 80 ntBASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 RNA5SP44-201ENST00000410446 133 ntBASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 GNG5P5-201ENST00000420444 220 ntBASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 AC092798.1-201ENST00000458542 409 ntBASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 PPIAP21-201ENST00000464473 501 ntBASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 RN7SL30P-201ENST00000488416 306 ntBASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 AC091874.1-201ENST00000511402 339 ntBASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 RNU6-58P-201ENST00000517143 103 ntBASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 AC096996.1-201ENST00000563813 325 ntBASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 MIR1269B-201ENST00000580405 75 ntBASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 AC069294.1-201ENST00000608397 350 ntBASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 AC090607.5-201ENST00000615692 224 ntBASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms