Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 SSXP1-201ENST00000453640 473 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 AP001486.1-201ENST00000463339 476 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 AL049873.1-201ENST00000480540 376 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 AC114786.4-201ENST00000508771 728 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 SCARNA13-201ENST00000516672 275 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 AC107934.1-201ENST00000522215 217 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 MTCO1P47-201ENST00000523889 1271 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 AL391261.3-201ENST00000557194 520 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 AC008088.1-201ENST00000580993 280 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 MIR4293-201ENST00000584305 78 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 AP000860.1-201ENST00000605250 559 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 AC012360.2-201ENST00000609349 391 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 BX664608.1-201ENST00000610519 487 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 AC034102.8-201ENST00000615146 484 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 AC006338.1-201ENST00000618453 749 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 AC010338.1-201ENST00000621823 717 ntBASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
ATG4BQ9Y4P1 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 MTND5P29-201ENST00000458676 1807 ntBASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 AC092593.1-201ENST00000515413 1815 ntBASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 RPL9P7-201ENST00000330965 580 ntBASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 SNORA26.8-201ENST00000391306 124 ntBASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 FCF1P1-201ENST00000432690 571 ntBASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 AC025750.2-201ENST00000442609 450 ntBASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 AC096576.1-201ENST00000489014 359 ntBASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 RPS27P26-201ENST00000494583 239 ntBASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 AC026801.1-201ENST00000497178 464 ntBASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 AC113155.1-201ENST00000511141 769 ntBASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 RAC1P5-201ENST00000512182 576 ntBASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 SNORA31.3-201ENST00000516029 96 ntBASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 RPS3AP4-201ENST00000555161 764 ntBASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 AC010620.2-201ENST00000600135 313 ntBASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 AC012065.4-201ENST00000602445 679 ntBASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 AL359999.1-201ENST00000604513 294 ntBASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 Z99129.2-201ENST00000619967 314 ntBASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 AC091953.2-201ENST00000623979 160 ntBASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
ATG4BQ9Y4P1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 CR848007.1-201ENST00000442354 1699 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 AL137003.2-201ENST00000606924 2538 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 RNU6-7-201ENST00000364784 107 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 RNU6-8-201ENST00000365467 107 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 RNY3P9-201ENST00000384727 106 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 Y_RNA.608-201ENST00000410647 95 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 RNU2-62P-201ENST00000410868 191 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 RNU6-193P-201ENST00000410977 107 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 NPM1P11-201ENST00000417106 855 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 AC098614.2-201ENST00000426040 255 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 ELOCP14-201ENST00000428070 331 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 ELOCP7-201ENST00000439968 331 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 AC119751.5-201ENST00000514077 770 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 RNU1-103P-201ENST00000516502 125 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 AC060788.1-201ENST00000521318 469 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 AP003181.2-201ENST00000528941 181 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 HPRT1P3-201ENST00000539521 576 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 MIR3118-1-201ENST00000581787 76 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 AC008739.2-201ENST00000597006 317 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 AC024153.1-201ENST00000603103 365 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 AC112191.3-201ENST00000604371 277 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 AC019159.1-201ENST00000605094 187 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 AL033523.1-201ENST00000605153 153 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 MIR7106-201ENST00000612419 65 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 AC090617.7-201ENST00000623952 126 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 AC092104.1-201ENST00000497346 1441 ntBASIC2.67□□□□□ -1.98
ATG4BQ9Y4P1 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms