Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 MIR7112-201ENST00000616126 65 ntBASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 uc_338.12-201ENST00000616344 181 ntBASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 AC007490.1-201ENST00000624321 703 ntBASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 MIR3199-2-201ENST00000636243 86 ntBASIC2.2□□□□□ -2.06
KCNIP3Q9Y2W7 AC004520.1-201ENST00000608362 1413 ntBASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 RNU6-660P-201ENST00000364566 109 ntBASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 RNU6-817P-201ENST00000391083 104 ntBASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 RNA5SP120-201ENST00000410900 112 ntBASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 ELOCP17-201ENST00000414751 326 ntBASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 AC098592.1-201ENST00000419352 333 ntBASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 RPS27AP14-201ENST00000422868 454 ntBASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 AL353729.1-201ENST00000425044 720 ntBASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 AL353777.1-201ENST00000425552 326 ntBASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 AC112220.1-201ENST00000434628 355 ntBASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 HMGN2P10-201ENST00000448085 265 ntBASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 RN7SL807P-201ENST00000470923 297 ntBASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 AC128713.1-201ENST00000471495 306 ntBASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 AC068587.1-201ENST00000483613 781 ntBASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 AL391813.2-201ENST00000609113 322 ntBASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 AC009159.1-201ENST00000618386 642 ntBASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 AC068831.8-201ENST00000620171 435 ntBASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 AC007998.5-201ENST00000622938 237 ntBASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 AC080128.1-201ENST00000474389 1917 ntBASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.19□□□□□ -2.06
KCNIP3Q9Y2W7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 SNORA62.3-201ENST00000365110 153 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 RNU6-701P-201ENST00000384059 107 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 RNU6-1072P-201ENST00000384703 107 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 RNU6-443P-201ENST00000384780 107 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 SNORA48.5-201ENST00000391143 135 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 MICF-203ENST00000432679 129 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AC093156.1-201ENST00000440382 670 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 NEFMP1-201ENST00000443423 1006 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 GDI2P2-201ENST00000445131 608 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AC133134.1-201ENST00000466800 359 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 RN7SL542P-201ENST00000467147 294 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 MRPL42P6-201ENST00000486397 371 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AC090096.1-201ENST00000489168 390 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AC006445.1-201ENST00000491925 405 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AC107222.1-201ENST00000510899 637 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 SNORA31.6-201ENST00000516241 130 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AC123904.2-201ENST00000548059 300 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AC006199.1-201ENST00000548728 219 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AC021739.1-201ENST00000559631 174 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AC007448.1-201ENST00000582714 234 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AL670379.6-201ENST00000603753 252 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AL670379.11-201ENST00000604059 253 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AC008162.1-201ENST00000604718 254 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AL670379.1-201ENST00000604752 252 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AL670379.5-201ENST00000605253 252 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AL670379.12-201ENST00000605291 253 ntBASIC2.18□□□□□ -2.06
KCNIP3Q9Y2W7 AL670379.8-201ENST00000605353 252 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms