Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 AC125257.1-201ENST00000560400 2930 ntBASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 Y_RNA.275-201ENST00000364726 110 ntBASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 RNU6-921P-201ENST00000384361 107 ntBASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 RNU6-790P-201ENST00000384479 105 ntBASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 U3.30-201ENST00000391308 210 ntBASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 AL079342.1-201ENST00000401460 267 ntBASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 RPS4XP7-201ENST00000406274 780 ntBASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 AL732292.1-201ENST00000426692 226 ntBASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 AL590233.1-201ENST00000430017 456 ntBASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 TDGF1P1-201ENST00000445734 527 ntBASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 AL445433.1-201ENST00000457507 257 ntBASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 RFPL4AP5-201ENST00000514977 504 ntBASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 ACA59.1-201ENST00000515966 143 ntBASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 Y_RNA.709-201ENST00000516952 92 ntBASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 RNU6-1092P-201ENST00000516955 87 ntBASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 RPL23AP84-201ENST00000571193 464 ntBASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 AC005951.2-201ENST00000576282 495 ntBASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 MIR3684-201ENST00000579779 74 ntBASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 AC022726.1-201ENST00000587475 207 ntBASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 AL672167.1-203ENST00000641299 2975 ntBASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 AC135776.4-201ENST00000624300 1904 ntBASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 DHX9P1-201ENST00000436565 3076 ntBASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 Z95331.1-201ENST00000623075 23112 ntBASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 FER-202ENST00000438717 1531 ntTSL 2 BASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 RNA5SP388-201ENST00000362584 119 ntBASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 RNA5SP258-201ENST00000362750 119 ntBASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 RNU4-90P-201ENST00000362773 141 ntBASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 RNU6-326P-201ENST00000365480 107 ntBASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 Y_RNA.563-201ENST00000384707 108 ntBASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 SNORA68.2-201ENST00000391263 128 ntBASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 U3.35-201ENST00000408405 208 ntBASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 AL159987.2-201ENST00000432754 307 ntBASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 snoU13.8-201ENST00000458890 104 ntBASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 AP006245.1-201ENST00000522549 120 ntBASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.06□□□□□ -1.44
PDZRN3Q9UPQ7 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 RNU1-83P-201ENST00000363426 164 ntBASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 RNA5SP479-201ENST00000364858 117 ntBASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 Y_RNA.369-201ENST00000365568 117 ntBASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 RNU6-1064P-201ENST00000410626 104 ntBASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 AL030996.1-201ENST00000411430 235 ntBASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 AC008280.1-201ENST00000418851 412 ntBASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 AC073069.1-201ENST00000428657 441 ntBASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 RNU7-59P-201ENST00000459101 61 ntBASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 RNU6-1211P-201ENST00000459179 105 ntBASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 RNU7-138P-201ENST00000459479 64 ntBASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 AP000926.1-201ENST00000479573 241 ntBASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 RPL23AP55-201ENST00000498163 452 ntBASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 AC093853.1-201ENST00000515689 483 ntBASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 RNU6-488P-201ENST00000515918 99 ntBASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 RNU6-709P-201ENST00000517257 104 ntBASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 AC093249.4-201ENST00000564755 259 ntBASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 MIR548X2-201ENST00000579776 100 ntBASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 AL160281.1-201ENST00000605307 311 ntBASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 Y_RNA.772-201ENST00000606692 102 ntBASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 MIR7973-1-201ENST00000614683 76 ntBASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 MIR6129-201ENST00000616087 109 ntBASIC6.05□□□□□ -1.44
PDZRN3Q9UPQ7 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms